Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_L05
(914 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 182 3e-46
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 169 4e-42
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 82 7e-16
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 79 5e-15
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 52 6e-07
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 50 3e-06
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 36 0.059
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 182 bits (444), Expect = 3e-46
Identities = 85/117 (72%), Positives = 99/117 (84%)
Frame = +3
Query: 255 TEAAVNPKAYPLADAALTAKILNLVQQATNYKQLXKGXNXATKTLNRGLSELIIMAADAE 434
++ VNPKAYPLADA LT IL+LVQQA+NYKQL KG N ATKTLNRG+SE ++MAAD E
Sbjct: 2 SQEVVNPKAYPLADAQLTMTILDLVQQASNYKQLKKGANEATKTLNRGISEFVVMAADTE 61
Query: 435 PLEIVLHIPILCEDXNVPYVFVRSKQALGRACGVSRXIISCSITINEGSQLKPXIPN 605
PLEI+LH+P+L ED NVPYVFV SKQALGRACGV+R +I+CS+T NEGSQLK I N
Sbjct: 62 PLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKTPIQN 118
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 169 bits (410), Expect = 4e-42
Identities = 79/115 (68%), Positives = 92/115 (80%)
Frame = +3
Query: 261 AAVNPKAYPLADAALTAKILNLVQQATNYKQLXKGXNXATKTLNRGLSELIIMAADAEPL 440
A VNPKAYPLAD+ L I LV QA NYKQL KG N ATKTLNRG++E ++MAADAEPL
Sbjct: 2 AEVNPKAYPLADSQLAQAIQELVSQAANYKQLKKGANEATKTLNRGIAEFVVMAADAEPL 61
Query: 441 EIVLHIPILCEDXNVPYVFVRSKQALGRACGVSRXIISCSITINEGSQLKPXIPN 605
EI+LH+P+L ED NVPYVFV SKQALGRACGV+R +I+CS+T NE S L+ I N
Sbjct: 62 EILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASNLRDPINN 116
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 81.8 bits (193), Expect = 7e-16
Identities = 39/108 (36%), Positives = 64/108 (59%)
Frame = +3
Query: 252 ETEAAVNPKAYPLADAALTAKILNLVQQATNYKQLXKGXNXATKTLNRGLSELIIMAADA 431
+T A+ P A PLA L + L LV++A+ K L +G K++ RG L I+A +
Sbjct: 11 KTPVALAPIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGQKGLCIIAGNI 70
Query: 432 EPLEIVLHIPILCEDXNVPYVFVRSKQALGRACGVSRXIISCSITINE 575
P++++ H+PILCE+ N+PYV+V SK+ L A G ++ C + + +
Sbjct: 71 SPIDVITHVPILCEEANIPYVYVPSKEDLATA-GTTKRPTCCVLVLTK 117
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 79.0 bits (186), Expect = 5e-15
Identities = 37/112 (33%), Positives = 64/112 (57%)
Frame = +3
Query: 240 VNMAETEAAVNPKAYPLADAALTAKILNLVQQATNYKQLXKGXNXATKTLNRGLSELIIM 419
V + A+ P A PLA L + L LV++A+ K L +G K++ RG L ++
Sbjct: 7 VEKKKAPTALAPIAKPLAGKKLCKRTLKLVRRASEAKCLKRGVKEVVKSIRRGNKGLCVI 66
Query: 420 AADAEPLEIVLHIPILCEDXNVPYVFVRSKQALGRACGVSRXIISCSITINE 575
A + P++++ H+PILCE+ N+PY++V SK+ L A G ++ C + + +
Sbjct: 67 AGNISPIDVITHVPILCEEANIPYIYVPSKEDLATA-GTTKRPTCCVLVMTK 117
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 52.0 bits (119), Expect = 6e-07
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +3
Query: 363 GXNXATKTLNRGLSELIIMAADAEPLEIVLHIPILCEDXNVPYVFVRSKQALGRACGVSR 542
G N T + + ++L+++A D +P+E+V+ +P LC VPY V+ K LG
Sbjct: 131 GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKT 190
Query: 543 XIISCSITINEGSQLK 590
+ C T+ +L+
Sbjct: 191 ASVLCLTTVKNEDKLE 206
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 363 GXNXATKTLNRGLSELIIMAADAEPLEIVLHIPILCEDXNVPYVFVRSKQALGRACGVSR 542
G + T + + ++L+++A D +P+E+V+ +P LC +PY V+ K LG
Sbjct: 116 GLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKT 175
Query: 543 XIISCSITINEGSQLK 590
+ C T+ +L+
Sbjct: 176 ASVLCLTTVKNEDKLE 191
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 35.5 bits (78), Expect = 0.059
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +3
Query: 363 GXNXATKTLNRGLSELIIMAADAEPLEIVLHIPILCEDXNV 485
G N T + + ++L+++A D +P+E+V+ +P LC +
Sbjct: 115 GLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEI 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,529,936
Number of Sequences: 37544
Number of extensions: 282087
Number of successful extensions: 452
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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