Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_L01
         (930 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317           32   0.75 
02_05_1277 - 35408097-35409080                                         31   1.7  
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    30   2.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510...    28   9.2  
02_05_0868 + 32342967-32343915,32344389-32344447                       28   9.2  

>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
          Length = 291

 Score = 31.9 bits (69), Expect = 0.75
 Identities = 18/48 (37%), Positives = 20/48 (41%)
 Frame = +2

Query: 545 RPPEXASQKSTLKSDVAXPXQDXKDTXPFPPGSXPXAPXXVPXPAPXP 688
           RPP    +K   +     P     D  P PP   P AP  VP PAP P
Sbjct: 110 RPPPPPRKKPQFQPPPQPPRA--WDPSPPPPPPAPAAPVLVPPPAPAP 155


>02_05_1277 - 35408097-35409080
          Length = 327

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
 Frame = +2

Query: 491 KRXGTVKRPRCWPFFHRLRPPEXASQKSTLKSDVAX---------PXQDXKDTXPFPPGS 643
           K  G VKR R     H   P   +   +T + D+A             D K + P PP  
Sbjct: 6   KHAGVVKRKRTKRPRHHAAPASSSESTTTEEEDMAHCLILLAQGAAVVDSKPSTPAPPPP 65

Query: 644 XPXAPXXVPXPAPXP 688
            P  P  +  PAP P
Sbjct: 66  PPAQPPVLAAPAPAP 80


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/47 (29%), Positives = 18/47 (38%)
 Frame = +2

Query: 548 PPEXASQKSTLKSDVAXPXQDXKDTXPFPPGSXPXAPXXVPXPAPXP 688
           PP+ A Q  +          +     P+PPG  P  P   P P P P
Sbjct: 696 PPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGP 742


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>03_02_0027 +
           5100865-5100878,5102241-5102708,5102795-5103021,
           5103670-5104577
          Length = 538

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
 Frame = +2

Query: 539 RLRPPEXASQKSTLKSDVAXPXQ-DXKDTXPFPPGSXPXAPXXVPXPAPXP 688
           R  PP  A +  T  S  A P Q       P P  + P  P   P PA  P
Sbjct: 183 RAAPPPPADEDGTSASAGAPPPQAPLPPPAPVPAPAPPPPPAAAPAPAAQP 233


>02_05_0868 + 32342967-32343915,32344389-32344447
          Length = 335

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/58 (27%), Positives = 23/58 (39%)
 Frame = +2

Query: 515 PRCWPFFHRLRPPEXASQKSTLKSDVAXPXQDXKDTXPFPPGSXPXAPXXVPXPAPXP 688
           PR W  +    PP  A  ++  +   A P +  +   P P  S   AP     P+P P
Sbjct: 78  PRRWLIYGGEAPPVAAPGRAFRQPAPAVPGRAFRQPGPAPAPSPAPAPPRRRMPSPPP 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,125,601
Number of Sequences: 37544
Number of extensions: 318493
Number of successful extensions: 1251
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)