Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_K24
         (989 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0145 + 1092764-1093351                                           31   1.9  

>06_01_0145 + 1092764-1093351
          Length = 195

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
 Frame = -1

Query: 569 VRXXXGGXGXAAXGXXGXXVXGXGXXGXXNEXGGVLGXXGRXGC-XXGRRTDIXVAGSXX 393
           VR   GG G A        V G G  G     GG+ G  G  GC   G R      G   
Sbjct: 91  VRIPRGGKGGAGGNAGPGGVGGKGGPGGDGGPGGIGGRGGDGGCGGVGGRGRKGGRGGRG 150

Query: 392 FRGXXGRDG 366
            RG  G  G
Sbjct: 151 GRGGSGGFG 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,148,217
Number of Sequences: 37544
Number of extensions: 250980
Number of successful extensions: 1002
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2893540780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)