Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_K24
         (989 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL035288-1|CAA22892.1|  671|Homo sapiens hypothetical protein pr...    31   8.6  
AL021920-3|CAI19632.1|  671|Homo sapiens espin pseudogene protein.     31   8.6  

>AL035288-1|CAA22892.1|  671|Homo sapiens hypothetical protein
           protein.
          Length = 671

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 325 PSPXDFPYLFLGLCTGSRLVARKAAASRREETLSHSCRRLGCRIP*ESSR 176
           PS  D+ Y  LG C G  LVAR   A R E  L  +    GC    ++SR
Sbjct: 416 PSTGDY-YRQLGRCPGETLVARPGMAHREEAELPGNHVPNGCAADPKASR 464


>AL021920-3|CAI19632.1|  671|Homo sapiens espin pseudogene protein.
          Length = 671

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 325 PSPXDFPYLFLGLCTGSRLVARKAAASRREETLSHSCRRLGCRIP*ESSR 176
           PS  D+ Y  LG C G  LVAR   A R E  L  +    GC    ++SR
Sbjct: 416 PSTGDY-YRQLGRCPGETLVARPGMAHREEAELPGNHVPNGCAADPKASR 464


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,147,258
Number of Sequences: 237096
Number of extensions: 1096475
Number of successful extensions: 3530
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3297
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13269380858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)