Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_K21
(1076 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.023
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.052
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.091
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.16
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.21
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.49
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 2.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 24 4.5
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.5
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 6.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 6.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 6.0
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 7.9
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 7.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 7.9
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.023
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 770 PXXXPXXPXPPPXXXXXRPPPPXXXPPPPXPXPXP 874
P P PP PPPP PPPP P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Frame = +1
Query: 760 PQXSXXXPPPPP-TPPPXXXRPP----PPTXXXPP 849
PQ S PPPPP + PP PP PP+ PP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 31.1 bits (67), Expect = 0.28
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +2
Query: 791 PXPPPXXXXXRPPPPXXXPPP--PXPXPXPPXAAXS*P 898
P PPP PPPP P P P P PP A S P
Sbjct: 1705 PTPPPPPMSV-PPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 29.9 bits (64), Expect = 0.64
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 800 PPXXXXXRPPPPXXXPPPPXPXPXPPXAAXS*P 898
PP PPPP PPP P P S P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 29.5 bits (63), Expect = 0.85
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +2
Query: 770 PXXXPXXPXPPPXXXXXRP--PPPXXXPPPPXPXPXPPXAAXS*P 898
P P PPP P PP PP P P P +A S P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 760 PQXSXXXPPPPPTPPPXXXRPPPPTXXXPPXXXXXPXSP 876
PQ + PTPPP PPP PP P +P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPP-PSAPPMPAGPPSAP 1731
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 787 PPPTPPPXXXRPPPPTXXXPPXXXXXPXSP 876
P P PPP PPP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.052
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Frame = +2
Query: 791 PXPPPXXXXXRPPPPXXXP------PPPXPXPXPPXAA 886
P PPP PPPP P PPP P P P +A
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 32.7 bits (71), Expect = 0.091
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXPP 849
PPPPP PP PPP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.49
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 7/43 (16%)
Frame = +2
Query: 791 PXPPPXXXXXRPPP-PXXXPPP------PXPXPXPPXAAXS*P 898
P PPP P P P PPP P P P PP A + P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 27.1 bits (57), Expect = 4.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 760 PQXSXXXPPPPPTPPP 807
P + PPPPP PPP
Sbjct: 768 PGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Frame = +2
Query: 791 PXPPPXXXXXRPPPPXXXP-PPPXP---XPXPP 877
P PPP P P P PPP P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.091
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +2
Query: 782 PXXPXPPPXXXXXRPP---PPXXXPPPPXPXPXPPXAAXS*P 898
P P PP RPP PP PPP P PP + + P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 761 LXXPXXXPXXPXPPPXXXXXRPPPPXXXPPPPXPXPXPPXAA 886
L P P P PP PP P PP P P P A
Sbjct: 137 LRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA 178
Score = 29.9 bits (64), Expect = 0.64
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPP 831
PPPPP P P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/52 (26%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +1
Query: 715 SPXRPXXXXXXXXXXPQXSXXXPPPPPTPPPXXXRPPP-PTXXXPPXXXXXP 867
+P P P PP P + PP + PP P+ PP P
Sbjct: 129 APPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXPPXXXXXPXSP 876
PP P PP PPT PP P SP
Sbjct: 124 PPSAPAPPTPQSELRPPT-SAPPRPSIPPPSP 154
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 845 PPPPXPXPXPPXAAXS*P 898
PPPP P P P AA + P
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 800 PPXXXXXRPPPPXXXPPPPXPXPXPP 877
PP PPPP PP P P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.49
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 784 PPPPTPPPXXXRPPPPTXXXPP 849
PPPP PPP P P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.9 bits (64), Expect = 0.64
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 782 PXXPXPPPXXXXXRPPPPXXXPPPP 856
P P PPP PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 760 PQXSXXXPPPPPTPPPXXXRPPPP 831
P + PPPPP P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 760 PQXSXXXPPPPPTPPPXXXRPPPP 831
PQ PPPPP P R PPP
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 29.9 bits (64), Expect = 0.64
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 770 PXXXPXXPXPPPXXXXXRPPPPXXXPPPPXPXPXP 874
P P P P P PP PPP P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Frame = +2
Query: 791 PXPPPXXXXXRPPP--PXXXPPPPXPXPXPPXAAXS*P 898
P PP RPP P P P P P P S P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP 267
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 791 PXPPPXXXXXRPPPPXXXPPPPXPXPXPPXAAXS 892
P PPP P P PP P P PP S
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +2
Query: 791 PXPPPXXXXXRPPPPXXXPPPPXP-XPXPPXAAXS 892
P PPP P P PP P P PP A S
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 791 PXPPPXXXXXRPPPPXXXPPPPXPXPXPP 877
P P P P P PP P P PP
Sbjct: 1065 PVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
Frame = +2
Query: 770 PXXXPXXPXPPPXXXXXRPPPPXXXPPPPXPXP---XPPXAAXS 892
P P P P PP P PP P P PP A S
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS 1156
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
Frame = +2
Query: 770 PXXXPXXPXPPPXXXXXRPPPPXXXPPPPXPXP---XPPXAAXS 892
P P P P PP P PP P P PP A S
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 4/33 (12%)
Frame = +2
Query: 791 PXPPPXXXXXRPPPPXXXPPPPXP----XPXPP 877
P P P PPP PP P P P PP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +2
Query: 770 PXXXPXXPXPPPXXXXXRPPPPXXXPPPPXPXPXPP 877
P P P P PPP PP P P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 760 PQXSXXXPPPPPTPPPXXXRPPPP 831
PQ + P P PTP PPPP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPP 748
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -3
Query: 876 GGXGXGXGG--GGXXXGGGGRXXXXXGGGXGXXGXXXG 769
GG G GG GG GGGR GG G G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 876 GGXGXGXGGGGXXXGGGGRXXXXXGGGXGXXGXXXG 769
G G G GG GG G GG G G G
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPP 825
PPPPP PP P
Sbjct: 370 PPPPPPPPELLNHSP 384
Score = 21.0 bits (42), Expect(2) = 4.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 769 SXXXPPPPPTP 801
S PPPPP P
Sbjct: 367 SYSPPPPPPPP 377
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 875 GEXGXXXXXGGXXXVGGGGRXXXGGGVGGGGG 780
G G GG GGG GGG GG GG
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 875 GEXGXXXXXGGXXXVGGGGRXXXGGGVGGGGG 780
G G GG GGG GGG GG GG
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPT 834
PPPPP P P P PT
Sbjct: 357 PPPPPMPAPIYNVPNVPT 374
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 797 PPPXXXXXRPPPPXXXPPPPXPXPXPP 877
P P RPPPP P P P P
Sbjct: 347 PTPQVQGSRPPPPPPMPAPIYNVPNVP 373
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 769 SXXXPPPPPTPPP 807
S PPPPP PPP
Sbjct: 185 SDYNPPPPPPPPP 197
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 791 PXPPPXXXXXRPPPPXXXPPPPXPXPXPPXAA 886
P PPP + PP P P PP A
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGA 1913
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 7.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 781 PPPPPTPPP 807
PPPPP PPP
Sbjct: 306 PPPPPPPPP 314
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXP 846
PPPP P PPPP P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEP 229
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXP 846
PPPP P PPPP P
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEP 242
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXP 846
PPPP P PPPP P
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEP 255
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXP 846
PPPP P PPPP P
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEP 268
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXP 846
PPPP P PPPP P
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEP 281
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXP 846
PPPP P PPPP P
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEP 294
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXP 846
PPPP P PPPP P
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEP 307
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXP 846
PPPP P PPPP P
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEP 320
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 781 PPPPPTPPPXXXRPPPPTXXXP 846
PPPP P PPPP P
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEP 333
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 7.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 781 PPPPPTPPP 807
PPPPP PPP
Sbjct: 945 PPPPPPPPP 953
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,477,130
Number of Sequences: 5004
Number of extensions: 16246
Number of successful extensions: 460
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 565779688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -