Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_K19
(1249 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 47 6e-06
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.012
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.027
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.19
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 1.3
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 3.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 5.4
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 46.8 bits (106), Expect = 6e-06
Identities = 44/160 (27%), Positives = 50/160 (31%), Gaps = 6/160 (3%)
Frame = +1
Query: 373 PATGQXKS*SLXPXXXXXPXGSPXPLPPXXPVXI*TXPPPPPXXX----RSXPPXXXXRP 540
P G S S P P + P P PPPPP R PP R
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 541 XXXTLPPNPHXXXPPXXXPALAXXXHAPXXXPPPLPXXPXXPPXSSHXALRTSAPS--PY 714
PP P P PAL +A PP+P P PP S+ +L SAP P
Sbjct: 385 VSN--PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPM 441
Query: 715 TRXXXXXXXXXXXXXDTXFLSXPXXXRXXPXXPSPTPXPA 834
P P P+P P PA
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPA 481
Score = 33.1 bits (72), Expect = 0.083
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = +3
Query: 900 PXPPPSXPIFPXXXPTXSPXXXXLPPARSXAPXSLCPSPXRLXAHXXPWPQ 1052
P PPS PI P P P LPPA P + P+P A PQ
Sbjct: 447 PPLPPSAPIAPPL-PAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAELPQ 496
Score = 31.1 bits (67), Expect = 0.33
Identities = 20/79 (25%), Positives = 26/79 (32%)
Frame = +3
Query: 828 ARHSPTXXLXTXPLAPDTPXRLXXPXPPPSXPIFPXXXPTXSPXXXXLPPARSXAPXSLC 1007
A + T + T P P + P PPS P+ P P PP + P +
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Query: 1008 PSPXRLXAHXXPWPQPXRP 1064
P P P P P
Sbjct: 469 LPPAAPAPPPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.8
Identities = 30/121 (24%), Positives = 34/121 (28%), Gaps = 9/121 (7%)
Frame = +1
Query: 376 ATGQXKS*SLXPXXXXXPXGSPXPLPPXXPVXI*TXPPPPPXXXRSXPPXXXXRPXXXTL 555
+ G S S P P P P PPP S PP RP
Sbjct: 220 SAGTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVS 279
Query: 556 --PPNPHXXXPPXXXP-------ALAXXXHAPXXXPPPLPXXPXXPPXSSHXALRTSAPS 708
P PP P ALA P PPP PP + + + P
Sbjct: 280 MNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPP 339
Query: 709 P 711
P
Sbjct: 340 P 340
Score = 28.7 bits (61), Expect = 1.8
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = +1
Query: 409 PXXXXXPXGSPXPLPPXXPVXI*TXPP--PP-PXXXRSXPPXXXXRPXXXTLPPNPHXXX 579
P P +P LPP P + P PP P PP P LPP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP-AAPAP 476
Query: 580 PPXXXPALA 606
PP PA A
Sbjct: 477 PPAPAPAPA 485
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +1
Query: 484 PPPPPXXXRSXPPXXXXRPXXXTLPPNPHXXXPPXXXPALAXXXHAPXXXPPPLPXXPXX 663
PPPPP P +LPP P PP A P P P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPP----PPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 664 PP 669
P
Sbjct: 369 AP 370
Score = 27.5 bits (58), Expect = 4.1
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Frame = +3
Query: 906 PPPSXPIF----PXXXPTXSPXXXXLPPARSXAPXSLCPSPXRLXAHXXPWPQPXRPQPX 1073
PP + P P P +P LPP+ AP P P + A P P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP----PLPAGMPAAPPLPPAAPAPPPA 479
Query: 1074 XXPXRXAPXAT 1106
P AP A+
Sbjct: 480 PAPAPAAPVAS 490
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.012
Identities = 24/95 (25%), Positives = 31/95 (32%)
Frame = +1
Query: 427 PXGSPXPLPPXXPVXI*TXPPPPPXXXRSXPPXXXXRPXXXTLPPNPHXXXPPXXXPALA 606
P +P +PP + P P P + PP P P P PP P+ A
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSV--AVPPVPA--PSGAPPVPKPSVAAPPVPVPSGA 1139
Query: 607 XXXHAPXXXPPPLPXXPXXPPXSSHXALRTSAPSP 711
P PP+P PP P+P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 35.1 bits (77), Expect = 0.020
Identities = 24/91 (26%), Positives = 30/91 (32%)
Frame = +1
Query: 439 PXPLPPXXPVXI*TXPPPPPXXXRSXPPXXXXRPXXXTLPPNPHXXXPPXXXPALAXXXH 618
P P PV + PP P + PP +P P PP P+ A
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP-KPAAGVPPVPPPSEAPPVP 1201
Query: 619 APXXXPPPLPXXPXXPPXSSHXALRTSAPSP 711
P PP+P PP + A P P
Sbjct: 1202 KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 32.3 bits (70), Expect = 0.14
Identities = 29/105 (27%), Positives = 35/105 (33%), Gaps = 8/105 (7%)
Frame = +1
Query: 427 PXGSPXPLPPXXPVXI*TXPPPPPXXXRSXPPXXXXRPXXXTLPPNPHXXXPPXXXPALA 606
P P P P + PP P PP P P P PP P+ A
Sbjct: 1160 PVPKPSVAAPPVPAPS-SGIPPVPKPAAGVPPVPP--PSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 607 XXXHAPXXXPPPLPXX----PXXPPXSSH----XALRTSAPSPYT 717
P PP+P P P SS R+S PSP++
Sbjct: 1217 PPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHS 1261
Score = 30.3 bits (65), Expect = 0.58
Identities = 29/96 (30%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Frame = +1
Query: 439 PXPLP----PXXPVXI*TXPPPPPXXXRSXPPXXXXRPXXXTLPPNPHXXXPPXXXPALA 606
P PLP P PV P P P P P P P P P+ A
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 607 XXXHAPXXXPP-PLPXXPXXP-PXSSHXALRTSAPS 708
AP PP P P P P S APS
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Score = 28.7 bits (61), Expect = 1.8
Identities = 27/111 (24%), Positives = 33/111 (29%), Gaps = 8/111 (7%)
Frame = +1
Query: 409 PXXXXXPXGSPXPLPP-------XXPVXI*TXPPPPPXXXRSXPPXXXXRPXXXTLPPNP 567
P P +P PP PV + + PP P + PP P P P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP--VPAPSGAPPVPKP 1164
Query: 568 HXXXPPXXXPALA-XXXHAPXXXPPPLPXXPXXPPXSSHXALRTSAPSPYT 717
PP P+ P PP+P PP P P T
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST 1215
Score = 26.6 bits (56), Expect = 7.2
Identities = 24/97 (24%), Positives = 29/97 (29%), Gaps = 2/97 (2%)
Frame = +1
Query: 427 PXGSPXPLPPXXPVXI*TXPPPPPXXXRSXPPXXXXRPXXXTLPPNPHXXX-PPXXXPAL 603
P + P P + PPP P P P PP P PP P++
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSI----PAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 604 AXXX-HAPXXXPPPLPXXPXXPPXSSHXALRTSAPSP 711
A P PP+P PP P P
Sbjct: 1100 AAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.027
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Frame = +1
Query: 427 PXGSPXPLPPXXPVXI*TXPPP----PPXXXRSXPPXXXXRPXXXT-LPPNPHXXXPPXX 591
P +P P P + T PP PP S PP P + LPP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 592 XPALAXXXHAPXXXPPPLPXXPXXPPXSSHXALRTSAPSP 711
P+ A PP +P P ++ + R S+ +P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAP 223
Score = 32.7 bits (71), Expect = 0.11
Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Frame = +3
Query: 822 PXARHSPTXXLXTXPLAPDTPXRLXXPXPPPSXPIFPXXXPTXSPXXXXLPP-ARSXAPX 998
P A PT P P P P S P P P P LPP A+ AP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP---PIPSSLPPPAQPAAPV 181
Query: 999 SLCPSPXRLXAHXXPWPQPXRPQP 1070
PS L + P P P P
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPPP 205
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.19
Identities = 24/76 (31%), Positives = 25/76 (32%)
Frame = +1
Query: 484 PPPPPXXXRSXPPXXXXRPXXXTLPPNPHXXXPPXXXPALAXXXHAPXXXPPPLPXXPXX 663
PPPPP P P PP P PP P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP---PPAPIMGGPPPPPPPPGVAGAGPPPPPPP------- 781
Query: 664 PPXSSHXALRTSAPSP 711
PP S R AP+P
Sbjct: 782 PPAVSAGGSRYYAPAP 797
Score = 30.7 bits (66), Expect = 0.44
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 427 PXGSPXPLPPXXPVXI*TXPPPPPXXXRSXPPXXXXRP 540
P +P P+PP P+ PPPPP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 409 PXXXXXPXGSPXPLPPXXPVXI*TXPPPPP 498
P P +P P+P P I PPPPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +3
Query: 891 LXXPXPPPSXPIFPXXXPTXSPXXXXLPPARSXAPXSLCPSPXRLXAHXXPWPQPXRP 1064
L P PPP I P P P PPA P P + P P P P
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVP---PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 1.0
Identities = 22/68 (32%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Frame = +1
Query: 493 PPXXXRSXPPXXXXRPXXXTLPPNPHXXXPPXXXPALAXXXHAPXXXPPPLP--XXPXXP 666
PP +S P P T PP P PP P + P PPPLP P P
Sbjct: 1690 PPVRPQSAAPPQMSAP---TPPPPPMSVPPPPSAPPMPAGP--PSAPPPPLPASSAPSVP 1744
Query: 667 PXSSHXAL 690
AL
Sbjct: 1745 NPGDRSAL 1752
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +3
Query: 837 SPTXXLXTXPLAPDT--PXRLXXPXPPPSXPIFPXXXPTXSPXXXXLPPARSXAPXSLCP 1010
+P + T P+ P + P ++ P PPP P P +P PP+ P
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPP--PPMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
Query: 1011 SP 1016
+P
Sbjct: 1740 AP 1741
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 1.3
Identities = 24/96 (25%), Positives = 31/96 (32%)
Frame = +1
Query: 370 APATGQXKS*SLXPXXXXXPXGSPXPLPPXXPVXI*TXPPPPPXXXRSXPPXXXXRPXXX 549
AP+ Q + P P P+ P P + P PP P RP
Sbjct: 601 APSVPQPPVAPVAPEVPSVPQRPAVPVVPEAP----SVPQPPAAPVVPEVPSVPQRPAVP 656
Query: 550 TLPPNPHXXXPPXXXPALAXXXHAPXXXPPPLPXXP 657
+P P PP P + P PP +P P
Sbjct: 657 VVPEAPSVPQPP-AAPVVPEVPSVP--QPPAVPVVP 689
Score = 28.7 bits (61), Expect = 1.8
Identities = 23/88 (26%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +1
Query: 409 PXXXXXPXGSPXPLPPXXPVX--I*TXPPPPPXXXRSXPPXXXXRPXXXTLPPNPHXXXP 582
P P P PP PV + P PP P RP +P P P
Sbjct: 578 PVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQP 637
Query: 583 PXXXPALAXXXHAPXXXPPPLPXXPXXP 666
P P + P P +P P P
Sbjct: 638 P-AAPVVPEVPSVPQR--PAVPVVPEAP 662
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 427 PXGSPXPLPPXXPVXI*TXPPPPP 498
P G+P P PP + PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.1 bits (57), Expect = 5.4
Identities = 20/77 (25%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = +1
Query: 484 PPPPPXXXRSXPPXXXXR---PXXXTLPPNPHXXXPPXXXPALAXXXHAPXXXPPPLPXX 654
PPPP PP P PNP+ P A A + PP P
Sbjct: 926 PPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNPYT 985
Query: 655 PXXPPXSSHXALRTSAP 705
P S+ T P
Sbjct: 986 PIAVASSTVNPAHTYKP 1002
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,832,932
Number of Sequences: 5004
Number of extensions: 21706
Number of successful extensions: 136
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 679334062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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