Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_K14
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec...    31   4.1  
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein...    31   4.1  
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re...    31   4.1  

>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
            (AA -19 to 4525) protein.
          Length = 4544

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +1

Query: 34   SLRFDLNRRNPRGQHEISTSCFVVPLRFVLRSCCCTGNGYSVPE-KNRCEGSIVEFDLYS 210
            S++ D    NP   +    S   +P     RSC CT  GYS+   +  CEG +  F LYS
Sbjct: 1839 SIQLDHKGTNPCSVNNGDCSQLCLPTSETTRSCMCTA-GYSLRSGQQACEG-VGSFLLYS 1896

Query: 211  QNFGRR 228
             + G R
Sbjct: 1897 VHEGIR 1902


>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
            lipoprotein-related protein 1 (alpha-2-macroglobulin
            receptor) protein.
          Length = 4544

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +1

Query: 34   SLRFDLNRRNPRGQHEISTSCFVVPLRFVLRSCCCTGNGYSVPE-KNRCEGSIVEFDLYS 210
            S++ D    NP   +    S   +P     RSC CT  GYS+   +  CEG +  F LYS
Sbjct: 1839 SIQLDHKGTNPCSVNNGDCSQLCLPTSETTRSCMCTA-GYSLRSGQQACEG-VGSFLLYS 1896

Query: 211  QNFGRR 228
             + G R
Sbjct: 1897 VHEGIR 1902


>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
            protein protein.
          Length = 4544

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +1

Query: 34   SLRFDLNRRNPRGQHEISTSCFVVPLRFVLRSCCCTGNGYSVPE-KNRCEGSIVEFDLYS 210
            S++ D    NP   +    S   +P     RSC CT  GYS+   +  CEG +  F LYS
Sbjct: 1839 SIQLDHKGTNPCSVNNGDCSQLCLPTSETTRSCMCTA-GYSLRSGQQACEG-VGSFLLYS 1896

Query: 211  QNFGRR 228
             + G R
Sbjct: 1897 VHEGIR 1902


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,509,658
Number of Sequences: 237096
Number of extensions: 1523309
Number of successful extensions: 2096
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2096
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)