Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_K13
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 185 4e-47
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 181 5e-46
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 180 9e-46
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 140 1e-33
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 138 5e-33
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 131 8e-31
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 131 8e-31
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 131 8e-31
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 90 2e-18
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 90 2e-18
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 30 2.6
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 30 2.6
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical... 29 6.0
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 185 bits (450), Expect = 4e-47
Identities = 86/185 (46%), Positives = 122/185 (65%), Gaps = 3/185 (1%)
Frame = +3
Query: 144 SNAEVPPXIFDQRTRLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPS 323
S+A VPP + R LQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLT-RHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAG 78
Query: 324 ELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGEN-X 500
L G DY +FK+GI+PMWED N GGRWL+ ++K++R LD +WL++++ ++GE
Sbjct: 79 GLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFD 138
Query: 501 ENSDEICGAVVNVRPKVDKIAXWTADAMKQHATIEIGKKLKEXLGIHXQ--IGFPVHRDT 674
E D ICGAVVNVR K DK++ WT DA + + IG+ LK+ L I + + VH+D+
Sbjct: 139 EYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDS 198
Query: 675 MVKXS 689
+ S
Sbjct: 199 SARTS 203
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 181 bits (441), Expect = 5e-46
Identities = 88/187 (47%), Positives = 123/187 (65%), Gaps = 5/187 (2%)
Frame = +3
Query: 144 SNAEVPPXIFDQRTRLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPS 323
S+A VPP + R LQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLT-RHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAG 78
Query: 324 ELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKK-QRFTD-LDRFWLDVVLLLIGEN 497
L G DY +FK+GI+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE
Sbjct: 79 GLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQLQRRTQLLDHYWLELLMAIVGEQ 138
Query: 498 -XENSDEICGAVVNVRPKVDKIAXWTADAMKQHATIEIGKKLKEXLGIHXQ--IGFPVHR 668
E D ICGAVVNVR K DK++ WT DA + + IG+ LK+ L I + + VH+
Sbjct: 139 FDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHK 198
Query: 669 DTMVKXS 689
D+ + S
Sbjct: 199 DSSARTS 205
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 180 bits (439), Expect = 9e-46
Identities = 88/188 (46%), Positives = 123/188 (65%), Gaps = 6/188 (3%)
Frame = +3
Query: 144 SNAEVPPXIFDQRTRLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPS 323
S+A VPP + R LQN+W+LW+ DRNK WE+ L ++ FDTVEDFW LY+HI+
Sbjct: 20 SDASVPPELLT-RHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAG 78
Query: 324 ELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKK--QRFTD-LDRFWLDVVLLLIGE 494
L G DY +FK+GI+PMWED N GGRWL+ ++K+ QR T LD +WL++++ ++GE
Sbjct: 79 GLNWGSDYYLFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGE 138
Query: 495 N-XENSDEICGAVVNVRPKVDKIAXWTADAMKQHATIEIGKKLKEXLGIHXQ--IGFPVH 665
E D ICGAVVNVR K DK++ WT DA + + IG+ LK+ L I + + VH
Sbjct: 139 QFDEYGDYICGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVH 198
Query: 666 RDTMVKXS 689
+D+ + S
Sbjct: 199 KDSSARTS 206
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 140 bits (339), Expect = 1e-33
Identities = 62/150 (41%), Positives = 94/150 (62%), Gaps = 1/150 (0%)
Frame = +3
Query: 186 RLQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQG 365
+L+ W+ W+ +++RNK+WEE L + TF +V +FW L+ IK PS L DY VF+ G
Sbjct: 18 KLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDYNVFRDG 77
Query: 366 IRPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGEN-XENSDEICGAVVNVR 542
I PMWE N+ GGRWLI++EK + +D W ++++ +IGE ++ + +CG V NVR
Sbjct: 78 IEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCGIVCNVR 137
Query: 543 PKVDKIAXWTADAMKQHATIEIGKKLKEXL 632
K KI+ WT ++ A + IG LK+ L
Sbjct: 138 GKGSKISVWTTNSADDGANLRIGGVLKQVL 167
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 138 bits (334), Expect = 5e-33
Identities = 63/149 (42%), Positives = 92/149 (61%), Gaps = 1/149 (0%)
Frame = +3
Query: 189 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 368
L+ W+ W+ +++RNK+WE+ L ++ TF+TV +FW LY I+ PS L DY VF+ I
Sbjct: 14 LKRNWTWWYLNDERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRDDI 73
Query: 369 RPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGEN-XENSDEICGAVVNVRP 545
+PMWE N GGRWLI ++K + +D WL++++ L+GE ++ + ICG V NVR
Sbjct: 74 QPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNVRG 133
Query: 546 KVDKIAXWTADAMKQHATIEIGKKLKEXL 632
K KI+ WT D + IG LKE L
Sbjct: 134 KGSKISVWTKDCNDDETNMRIGVVLKEKL 162
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 131 bits (316), Expect = 8e-31
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Frame = +3
Query: 189 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 368
LQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+ I
Sbjct: 11 LQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDI 70
Query: 369 RPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGEN-XENSDEICGAVVNVRP 545
+P WE N GGRWLI + K + LD WL+++L LIGE ++ + ICG V NVR
Sbjct: 71 QPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRG 130
Query: 546 KVDKIAXWTADAMKQHATIEIGKKLKEXL 632
+ KI+ WT + + IG LKE L
Sbjct: 131 QGSKISVWTKNCNDDDTNMRIGVVLKEKL 159
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 131 bits (316), Expect = 8e-31
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Frame = +3
Query: 189 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 368
LQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+ I
Sbjct: 50 LQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDI 109
Query: 369 RPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGEN-XENSDEICGAVVNVRP 545
+P WE N GGRWLI + K + LD WL+++L LIGE ++ + ICG V NVR
Sbjct: 110 QPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRG 169
Query: 546 KVDKIAXWTADAMKQHATIEIGKKLKEXL 632
+ KI+ WT + + IG LKE L
Sbjct: 170 QGSKISVWTKNCNDDDTNMRIGVVLKEKL 198
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 131 bits (316), Expect = 8e-31
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Frame = +3
Query: 189 LQNQWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHDYAVFKQGI 368
LQ WS WF ++DRN +W++ L ++ TF+TV +FW Y I PS L DY VF+ I
Sbjct: 11 LQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDI 70
Query: 369 RPMWEDDANKMGGRWLISLEKKQRFTDLDRFWLDVVLLLIGEN-XENSDEICGAVVNVRP 545
+P WE N GGRWLI + K + LD WL+++L LIGE ++ + ICG V NVR
Sbjct: 71 QPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRG 130
Query: 546 KVDKIAXWTADAMKQHATIEIGKKLKEXL 632
+ KI+ WT + + IG LKE L
Sbjct: 131 QGSKISVWTKNCNDDDTNMRIGVVLKEKL 159
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 90.2 bits (214), Expect = 2e-18
Identities = 44/119 (36%), Positives = 67/119 (56%)
Frame = +3
Query: 276 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 455
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 456 RFWLDVVLLLIGENXENSDEICGAVVNVRPKVDKIAXWTADAMKQHATIEIGKKLKEXL 632
R W ++++ +IGE DE+CGAV ++R + D I+ W +A T I + L+ L
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVL 180
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 90.2 bits (214), Expect = 2e-18
Identities = 44/119 (36%), Positives = 67/119 (56%)
Frame = +3
Query: 276 TVEDFWRLYHHIKLPSELRQGHDYAVFKQGIRPMWEDDANKMGGRWLISLEKKQRFTDLD 455
+VE FW + H K P+E+ D FK G++P+WED AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 456 RFWLDVVLLLIGENXENSDEICGAVVNVRPKVDKIAXWTADAMKQHATIEIGKKLKEXL 632
R W ++++ +IGE DE+CGAV ++R + D I+ W +A T I + L+ L
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVL 180
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 180 RTRLQN-QWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHD-YAV 353
RTR N QW +R + L F + + H++ P+++R+ + Y V
Sbjct: 686 RTRAINIQWPTLVDQRNRKREHVAVLHAKMWFGRTDQLTKWKEHVQ-PADIRRFMEMYEV 744
Query: 354 FKQGIRPMWEDDANKMGGRW 413
+G+ W+D+A+ G+W
Sbjct: 745 QTKGLALKWKDEADIYDGKW 764
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 180 RTRLQN-QWSLWFYDNDRNKTWEENLIELTTFDTVEDFWRLYHHIKLPSELRQGHD-YAV 353
RTR N QW +R + L F + + H++ P+++R+ + Y V
Sbjct: 686 RTRAINIQWPTLVDQRNRKREHVAVLHAKMWFGRTDQLTKWKEHVQ-PADIRRFMEMYEV 744
Query: 354 FKQGIRPMWEDDANKMGGRW 413
+G+ W+D+A+ G+W
Sbjct: 745 QTKGLALKWKDEADIYDGKW 764
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = -3
Query: 661 TGKPIWXCIPXCSFSFFPI--SIVACCFIASAVXIAILSTFGLTLTTAPQISSEFSXFSP 488
T P +P SFS PI S+ S+ ++ST T+T+ +++ S SP
Sbjct: 474 TQSPGTTVVPSGSFSTAPIVTSVSTRATRVSSSTAPVVSTVTSTITSQSIVTTNKSS-SP 532
Query: 487 IKRRTTSNQNLSKSVKR 437
I +TT++ N+S S +
Sbjct: 533 ITSKTTTSINVSSSTTK 549
>AF045642-12|AAD34648.1| 348|Caenorhabditis elegans Hypothetical
protein C17H12.8 protein.
Length = 348
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 541 LTLTTAPQISSEFSXFSPIKRRTTSNQNLSKSVKRCFFSRLISHLPPILLASSSHIG 371
LT T S++F F TT Q ++KSV R++ H +L + +H+G
Sbjct: 84 LTRTIVSSRSAKFVHFYIFPNTTTKFQVITKSVNMHSSFRIVVHFERMLNTTVTHLG 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,715,514
Number of Sequences: 27780
Number of extensions: 313554
Number of successful extensions: 709
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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