Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_K06
(986 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 34 0.14
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 34 0.14
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 34 0.14
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 34 0.14
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.41
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.41
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.41
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.55
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.72
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.72
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.72
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 31 1.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 2.2
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 2.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.2
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 30 2.9
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 29 3.9
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 5.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 5.1
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 29 6.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.7
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 6.7
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 29 6.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.7
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.9
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 34.3 bits (75), Expect = 0.14
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 611 LPXPPPXPPXPXTPPXPLPXXTPP 682
+P PPP PP P PP P PP
Sbjct: 1 MPPPPPPPPPPPPPPPPAASAPPP 24
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = +2
Query: 488 PPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXXXXXXXSLPXPPPXPPXPXTPPXPLP 667
PP A PP + P S PPP PP P + P P
Sbjct: 114 PPTASSAPPVPPPAP--VPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKP 171
Query: 668 XXTPPXXA 691
PP A
Sbjct: 172 TPPPPPPA 179
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 34.3 bits (75), Expect = 0.14
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 611 LPXPPPXPPXPXTPPXPLPXXTPP 682
+P PPP PP P PP P PP
Sbjct: 1 MPPPPPPPPPPPPPPPPAASAPPP 24
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/68 (26%), Positives = 20/68 (29%)
Frame = +2
Query: 488 PPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXXXXXXXSLPXPPPXPPXPXTPPXPLP 667
PP A PP + P S PPP PP P + P P
Sbjct: 114 PPTASSAPPVPPPAP--VPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKP 171
Query: 668 XXTPPXXA 691
PP A
Sbjct: 172 TPPPPPPA 179
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.14
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLPXXTPP 682
P PPP PP P P P+P PP
Sbjct: 89 PTPPPPPPKPTIRPPPIPASPPP 111
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 34.3 bits (75), Expect = 0.14
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLPXXTPP 682
P PPP PP P P P+P PP
Sbjct: 311 PTPPPPPPKPTIRPPPIPASPPP 333
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.41
Identities = 24/95 (25%), Positives = 28/95 (29%), Gaps = 5/95 (5%)
Frame = +2
Query: 413 GGNTVIHRIXGXXXKXPXDPXAXXXPPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXX 592
GG++ + I G P P PP PP + G PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 593 XXXXXSLPXPPPXPPXP-----XTPPXPLPXXTPP 682
PPP PP P PP P P P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = +2
Query: 470 PXAXXXPPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXXXXXXXSLPXPPPXPPXPXT 649
P PP PP S G PP P PPP PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP-PPGMFA 794
Query: 650 PPXP-LPXXTPP 682
P P +P PP
Sbjct: 795 PMAPVIPDYLPP 806
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.41
Identities = 24/95 (25%), Positives = 28/95 (29%), Gaps = 5/95 (5%)
Frame = +2
Query: 413 GGNTVIHRIXGXXXKXPXDPXAXXXPPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXX 592
GG++ + I G P P PP PP + G PP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 593 XXXXXSLPXPPPXPPXP-----XTPPXPLPXXTPP 682
PPP PP P PP P P P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = +2
Query: 470 PXAXXXPPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXXXXXXXSLPXPPPXPPXPXT 649
P PP PP S G PP P PPP PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP-PPGMFA 794
Query: 650 PPXP-LPXXTPP 682
P P +P PP
Sbjct: 795 PMAPVIPDYLPP 806
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.41
Identities = 24/95 (25%), Positives = 28/95 (29%), Gaps = 5/95 (5%)
Frame = +2
Query: 413 GGNTVIHRIXGXXXKXPXDPXAXXXPPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXX 592
GG++ + I G P P PP PP + G PP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 593 XXXXXSLPXPPPXPPXP-----XTPPXPLPXXTPP 682
PPP PP P PP P P P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/72 (27%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = +2
Query: 470 PXAXXXPPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXXXXXXXSLPXPPPXPPXPXT 649
P PP PP S G PP P PPP PP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP-PPGMFA 377
Query: 650 PPXP-LPXXTPP 682
P P +P PP
Sbjct: 378 PMAPVIPDYLPP 389
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 515 CPPXSXGLXPPXRASXXXTAXXXXXXXXXXXSLPXPPPXPPXPXTPPXPLP 667
CPP + P P PPP PP P PP P P
Sbjct: 30 CPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 31.9 bits (69), Expect = 0.72
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLPXXTP 679
P PPP PP PP P+P +P
Sbjct: 65 PPPPPPPPMCPPPPPPMPSYSP 86
Score = 31.5 bits (68), Expect = 0.96
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLPXXTPP 682
P P P PP P P PLP PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPP 49
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLPXXTPP 682
P PP PP P PP P+ PP
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPPP 79
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = +2
Query: 461 PXDPXAXXXPPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXXXXXXXSLPXPPPXPPX 640
P P PP PP + G PP R P PPP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAGS 296
Query: 641 PXTPPXPLPXXTPP 682
P PP P P +PP
Sbjct: 297 P--PPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = +2
Query: 461 PXDPXAXXXPPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXXXXXXXSLPXPPPXPPX 640
P P PP PP + G PP R P PPP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAGS 317
Query: 641 PXTPPXPLPXXTPP 682
P PP P P +PP
Sbjct: 318 P--PPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = +2
Query: 461 PXDPXAXXXPPNXXXAXXCPPXSXGLXPPXRASXXXTAXXXXXXXXXXXSLPXPPPXPPX 640
P P PP PP + G PP R P PPP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP-PPPRAGS 302
Query: 641 PXTPPXPLPXXTPP 682
P PP P P +PP
Sbjct: 303 P--PPPPPPRGSPP 314
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 31.5 bits (68), Expect = 0.96
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = +2
Query: 608 SLPXPPPXPPX----PXTPPXPLPXXTPP 682
S P PPP P P PP PLP TPP
Sbjct: 944 SPPVPPPIPAIRHRTPSPPPPPLPSSTPP 972
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +2
Query: 614 PXPPPXP-PXPXTPPXPLPXXTPP 682
P PPP P P P P P P TPP
Sbjct: 637 PQPPPPPSPSPEPEPEPKPPVTPP 660
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 620 PPPXPPXPXTPPXPLPXXTPPXXA 691
PPP PP P PP P P PP A
Sbjct: 132 PPPPPPPPHYPPPP-PHYPPPPPA 154
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 608 SLPXPPPXPPXPXTPPXPLPXXTPP 682
S P PPP PP P P+P PP
Sbjct: 1337 SPPPPPPPPPPPSDDLTPVPPPPPP 1361
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 608 SLPXPPPXPPXPXTPPXPLPXXTPP 682
S P PPP PP P P L PP
Sbjct: 1334 SSPSPPPPPPPPPPPSDDLTPVPPP 1358
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLPXXTPP 682
P PPP PP P P P PP
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPP 1363
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 608 SLPXPPPXPPXPXTPPXP 661
S P PPP PP P PP P
Sbjct: 353 SPPAPPPPPPPPPPPPPP 370
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 620 PPPXPPXPXTPPXPLPXXTP 679
PP PP P PP P P TP
Sbjct: 354 PPAPPPPPPPPPPPPPPQTP 373
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -2
Query: 679 GGXXXERGGGXXGXGGXRGGXRE*XXXXXXXXXXXXXXGXXGSXGGXEPXXXRGAXGG 506
GG RGGG G GG RGG G GG + G GG
Sbjct: 50 GGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGG 107
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 611 LPXPPPXPPXPXTPPXPLPXXTPP 682
LP PPP PP PP P PP
Sbjct: 144 LPGPPPKPPCQKCPPGPPGPAGPP 167
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 620 PPPXPPXPXTPPXPLPXXTPP 682
PPP P P PP P P PP
Sbjct: 67 PPPICPPPPPPPMPCPPPPPP 87
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 623 PPXPPXPXTPPXPLPXXTPPXXAXR 697
PP P P PP P+P PP R
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPPMPR 90
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 620 PPPXPPXPXTPPXP-LPXXTPPXXAXR 697
PPP PP P PP P +P + P R
Sbjct: 73 PPPPPPMPCPPPPPPMPRPSCPCMMQR 99
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXP 661
P PPP PP P PP P
Sbjct: 134 PPPPPSPPPPPPPPPP 149
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 611 LPXPPPXPPXPXTPPXPLPXXTPP 682
+P PP P PP PLP PP
Sbjct: 676 IPAARDHPPQPQQPPPPLPTPKPP 699
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 611 LPXPPPXPPXPXTPPXPLPXXTPP 682
+P PP P PP PLP PP
Sbjct: 676 IPAARDHPPQPQQPPPPLPTPKPP 699
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Frame = +2
Query: 608 SLPXPPPXP-----PXPXTPPXPLPXXTPPXXAXR 697
S P PPP P P P +PP P TPP R
Sbjct: 136 SSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRR 170
>Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical
protein F36G9.13 protein.
Length = 917
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 620 PPPXPPXPXTPPXPLPXXTP 679
PPP PP P PP P P
Sbjct: 848 PPPPPPVPTAPPAKTPETAP 867
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 608 SLPXPPPXPPXPXTPPXPLPXXTPP 682
++ PPP P P PP P+ PP
Sbjct: 173 AISAPPPPRPPPQEPPKPVEQAAPP 197
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +2
Query: 608 SLPXPPPXPP--XPXTPPXPLPXXTPPXXA 691
S P PPP PP P + P P P PP A
Sbjct: 495 SPPPPPPLPPIATPSSVPPPPPPPPPPPPA 524
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 682 RGGXXXERGGGXXGXGGXRGGXR 614
RGG RGG G GG RGG R
Sbjct: 179 RGGGGGFRGGDRGGFGGGRGGFR 201
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 623 PPXPPXPXTPPXPLPXXTP 679
PP PP P PP P P P
Sbjct: 512 PPLPPLPPPPPPPKPKPAP 530
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 679 GGXXXERGGGXXGXGGXRGG 620
GG RGGG G GG RGG
Sbjct: 51 GGPGWGRGGGGSGWGGGRGG 70
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 682 RGGXXXERGGGXXGXGGXRGGXR 614
RGG RGGG GG RGG R
Sbjct: 331 RGGFDGGRGGGGGFRGGDRGGFR 353
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 623 PPXPPXPXTPPXPLPXXTP 679
PP PP P PP P P P
Sbjct: 512 PPLPPLPPPPPPPKPKPAP 530
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLPXXTPP 682
P PPP PP P P P PP
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLPXXTPP 682
P PPP PP P P P PP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLPXXTPP 682
P PPP PP P P P PP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 25.0 bits (52), Expect(2) = 8.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 620 PPPXPPXPXTPP 655
PPP PP P PP
Sbjct: 79 PPPPPPPPSDPP 90
Score = 21.8 bits (44), Expect(2) = 8.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 611 LPXPPPXPP 637
LP PPP PP
Sbjct: 78 LPPPPPPPP 86
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 620 PPPXPPXPXTPPXPLPXXTP 679
PPP P P PP P P +P
Sbjct: 112 PPPAPAAPCCPPPPPPTPSP 131
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +2
Query: 614 PXPPPXP-PXPXTPPXPLPXXTPP 682
P PPP P P P PP P PP
Sbjct: 253 PPPPPCPMPIPCPPPPPACSCPPP 276
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLP 667
P PPP PP P P P P
Sbjct: 272 PMPPPMPPTPGMTPRPPP 289
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 614 PXPPPXPPXPXTPPXPLP 667
P PPP PP P P P P
Sbjct: 282 PMPPPMPPTPGMTPRPPP 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,254,697
Number of Sequences: 27780
Number of extensions: 175087
Number of successful extensions: 2229
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1747
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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