Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_K05
(952 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.52
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.52
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.52
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 3.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.52
Identities = 24/86 (27%), Positives = 24/86 (27%)
Frame = +3
Query: 594 PHPTGLXPYXXXSPXXXPPLXXPVPXLXXYXIPVPPXLPFXXXXXLSPXSXXXXXPXXXX 773
P P GL P P PP P P P PP P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLP-PITGG---PPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 774 XPXPPXXXXXXXXXPPPXPPXXXXXP 851
P PP PPP PP P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.52
Identities = 24/86 (27%), Positives = 24/86 (27%)
Frame = +3
Query: 594 PHPTGLXPYXXXSPXXXPPLXXPVPXLXXYXIPVPPXLPFXXXXXLSPXSXXXXXPXXXX 773
P P GL P P PP P P P PP P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLP-PITGG---PPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 774 XPXPPXXXXXXXXXPPPXPPXXXXXP 851
P PP PPP PP P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.52
Identities = 24/86 (27%), Positives = 24/86 (27%)
Frame = +3
Query: 594 PHPTGLXPYXXXSPXXXPPLXXPVPXLXXYXIPVPPXLPFXXXXXLSPXSXXXXXPXXXX 773
P P GL P P PP P P P PP P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLP-PITGG---PPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Query: 774 XPXPPXXXXXXXXXPPPXPPXXXXXP 851
P PP PPP PP P
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPPGMFAP 378
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/72 (27%), Positives = 24/72 (33%)
Frame = +2
Query: 533 PXAPPPLNEHHKNPTXQSXVATPXRTXTIPXXFPLXXSPPAXXCSXPXRLPDTCPAXSPL 712
P PPP + + P T P P PP S R P T P+ P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 713 PXXLXPFSXLPP 748
P S +PP
Sbjct: 182 NPPRTPPSPIPP 193
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +1
Query: 709 PSXXPXPFLLXPXXXXXPXPXXXPXX--PXXXXXXXXPPXPPXPXXPXPXXXXPXXS 873
P P P + P P P P P PP PP P P P P S
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYS 85
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/84 (26%), Positives = 26/84 (30%), Gaps = 4/84 (4%)
Frame = +3
Query: 594 PHPTGLXPYXXXSPXXXPP----LXXPVPXLXXYXIPVPPXLPFXXXXXLSPXSXXXXXP 761
P P + P +P PP + P P P PP +P P S
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP--PPSRFGPPG 329
Query: 762 XXXXXPXPPXXXXXXXXXPPPXPP 833
P PP PPP PP
Sbjct: 330 MGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/69 (26%), Positives = 21/69 (30%)
Frame = +3
Query: 645 PPLXXPVPXLXXYXIPVPPXLPFXXXXXLSPXSXXXXXPXXXXXPXPPXXXXXXXXXPPP 824
PP+ P P + P+PP P P S P P PPP
Sbjct: 261 PPVPPPPPSVTPMPPPMPP-TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 319
Query: 825 XPPXXXXXP 851
PP P
Sbjct: 320 PPPSRFGPP 328
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +1
Query: 706 SPSXXPXPFLLXPXXXXXPX--PXXXPXXPXXXXXXXXPPXPPXPXXPXPXXXXPXXSXP 879
SPS P P + P P P P P PP PP P P P P P
Sbjct: 205 SPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGP-PTRRPPGPPGP 263
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/84 (26%), Positives = 26/84 (30%), Gaps = 4/84 (4%)
Frame = +3
Query: 594 PHPTGLXPYXXXSPXXXPP----LXXPVPXLXXYXIPVPPXLPFXXXXXLSPXSXXXXXP 761
P P + P +P PP + P P P PP +P P S
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP--PPSRFGPPG 339
Query: 762 XXXXXPXPPXXXXXXXXXPPPXPP 833
P PP PPP PP
Sbjct: 340 MGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/69 (26%), Positives = 21/69 (30%)
Frame = +3
Query: 645 PPLXXPVPXLXXYXIPVPPXLPFXXXXXLSPXSXXXXXPXXXXXPXPPXXXXXXXXXPPP 824
PP+ P P + P+PP P P S P P PPP
Sbjct: 271 PPVPPPPPSVTPMPPPMPP-TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPP 329
Query: 825 XPPXXXXXP 851
PP P
Sbjct: 330 PPPSRFGPP 338
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/81 (29%), Positives = 28/81 (34%), Gaps = 7/81 (8%)
Frame = +2
Query: 539 APPPLNEHHKNPTXQSXVAT-PXRTXTIPXXFPLXXSPPAXXCSXPXRLPDTC------P 697
APPP PT + ++T P + T P P PP P P P
Sbjct: 440 APPP--PPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPP 497
Query: 698 AXSPLPXXLXPFSXLPPXXSP 760
PLP P S PP P
Sbjct: 498 PPPPLPPIATPSSVPPPPPPP 518
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.5
Identities = 24/85 (28%), Positives = 25/85 (29%)
Frame = +1
Query: 625 PFPPXXLPPCXXLFXXXPXTXYLSRXFSPSXXPXPFLLXPXXXXXPXPXXXPXXPXXXXX 804
P PP PP F T Y S +P P P P P P P
Sbjct: 434 PPPPPSAPPTIK-FPISTGTSYSST--TPPTTPKPAPPPPSRIPNPSPSPQPAE----VS 486
Query: 805 XXXPPXPPXPXXPXPXXXXPXXSXP 879
PP PP P P P P
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPPP 511
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/74 (24%), Positives = 22/74 (29%)
Frame = +2
Query: 539 APPPLNEHHKNPTXQSXVATPXRTXTIPXXFPLXXSPPAXXCSXPXRLPDTCPAXSPLPX 718
APPP + P A P P P+ +P P P P P
Sbjct: 176 APPPPRPPPQEPPKPVEQAAPPPPPA-PMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPA 234
Query: 719 XLXPFSXLPPXXSP 760
+ P PP P
Sbjct: 235 PVEPSDPAPPSKLP 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,743,366
Number of Sequences: 27780
Number of extensions: 286649
Number of successful extensions: 954
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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