Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_J24
(1006 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.045
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.045
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.045
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.045
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.045
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.14
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.18
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.18
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.18
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.18
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.32
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.32
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.56
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.0
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 4.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.0
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 4.0
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 4.0
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 5.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 5.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 5.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 6.9
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.9 bits (79), Expect = 0.045
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = -1
Query: 730 PDAXGXXXGXXXAEGXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXX 551
P G G G G G G G G G GG G GG G G
Sbjct: 78 PCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG-GGGGGCGGGGGGCGGGGGGCGGGGG 136
Query: 550 GXCGGG 533
G CGGG
Sbjct: 137 GGCGGG 142
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = -1
Query: 751 GARGQXRPDAXGXXXGXXXAEGXXGXXXGXGEXXGXXXXXGVXGXG-GXGXXGGXXXXEX 575
G G G G G G G G G G G G G G GG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 574 GXXGXXXXGXCGGG 533
G G G CGGG
Sbjct: 145 GGCGGGSSGGCGGG 158
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 688 GXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXXGXCGGG 533
G G G G G G G GG G GG G G G CGGG
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGG-GSSGGCGGGSSGGCGGGGGGGCGGG 166
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -1
Query: 688 GXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXXGXCGGG 533
G G G G G G G G G GG G G G CGGG
Sbjct: 123 GCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGG 174
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -1
Query: 706 GXXXAEGXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXXGXCGGG 533
G G G G G G G GG G GG G G CGGG
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGG 113
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 35.9 bits (79), Expect = 0.045
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = -1
Query: 730 PDAXGXXXGXXXAEGXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXX 551
P G G G G G G G G G GG G GG G G
Sbjct: 78 PCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG-GGGGGCGGGGGGCGGGGGGCGGGGG 136
Query: 550 GXCGGG 533
G CGGG
Sbjct: 137 GGCGGG 142
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = -1
Query: 751 GARGQXRPDAXGXXXGXXXAEGXXGXXXGXGEXXGXXXXXGVXGXG-GXGXXGGXXXXEX 575
G G G G G G G G G G G G G G GG
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 574 GXXGXXXXGXCGGG 533
G G G CGGG
Sbjct: 145 GGCGGGSSGGCGGG 158
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -1
Query: 688 GXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXXGXCGGG 533
G G G G G G G GG G GG G G G CGGG
Sbjct: 116 GCGGGGGGCGGGGGGCGGGGGGGCGG-GSSGGCGGGSSGGCGGGGGGGCGGG 166
Score = 33.1 bits (72), Expect = 0.32
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -1
Query: 688 GXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXXGXCGGG 533
G G G G G G G G G GG G G G CGGG
Sbjct: 123 GCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGG 174
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -1
Query: 706 GXXXAEGXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXXGXCGGG 533
G G G G G G G GG G GG G G CGGG
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGG 113
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.045
Identities = 25/105 (23%), Positives = 28/105 (26%)
Frame = +3
Query: 528 SXPPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXP 707
S PPP P P PP PP P T P SP P P
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 708 XXXPXASGRXXPRAPRXXRELGXXAARXSXRAXPXXPPXQVXRYP 842
P R P + + P PP Q + P
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 340
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.045
Identities = 25/105 (23%), Positives = 28/105 (26%)
Frame = +3
Query: 528 SXPPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXP 707
S PPP P P PP PP P T P SP P P
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 708 XXXPXASGRXXPRAPRXXRELGXXAARXSXRAXPXXPPXQVXRYP 842
P R P + + P PP Q + P
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 361
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.045
Identities = 25/105 (23%), Positives = 28/105 (26%)
Frame = +3
Query: 528 SXPPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXP 707
S PPP P P PP PP P T P SP P P
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 708 XXXPXASGRXXPRAPRXXRELGXXAARXSXRAXPXXPPXQVXRYP 842
P R P + + P PP Q + P
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 346
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = -1
Query: 730 PDAXGXXXGXXXAEGXXGXXXGXGEXXGXXXXXGVXGXGGX-GXXGGXXXXEXGXXGXXX 554
P A G G G G G G G G GG G GG G G
Sbjct: 115 PPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGG 174
Query: 553 XGXCGGG 533
G CGGG
Sbjct: 175 GGGCGGG 181
Score = 33.1 bits (72), Expect = 0.32
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = -1
Query: 751 GARGQXRPDAXGXXXGXXXAEGXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXG 572
G G G G G G G G G GG G GG G
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGG 139
Query: 571 XXGXXXXGXCGGG 533
G G CGGG
Sbjct: 140 GCGGGGGGGCGGG 152
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = -1
Query: 718 GXXXGXXXAEGXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXXGXCG 539
G G G G G G G G G G GG G G G CG
Sbjct: 128 GCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCG 187
Query: 538 GG 533
GG
Sbjct: 188 GG 189
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -1
Query: 667 GXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXGXXGXXXXGXCGGG 533
G G G G GG G GG G G G CGGG
Sbjct: 64 GCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGG 108
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = -1
Query: 751 GARGQXRPDAXGXXXGXXXAEGXXGXXXGXGEXXGXXXXXGVXGXGGXGXXGGXXXXEXG 572
G G G G G G G G G GG G GG G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 571 XXGXXXXGXCGGG 533
G CGGG
Sbjct: 83 GGCGGGGGGCGGG 95
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPS 692
PPP P P LP P PP P+ P P P P PS
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPS 83
Score = 31.5 bits (68), Expect = 0.98
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPL-TPXXXXXPXXSPXPXXXPXXPSAXXXPX 710
PPP P P PP P PP P+ P P P P P P P
Sbjct: 27 PPPCPP-------PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Query: 711 XXPXAS 728
P S
Sbjct: 80 PMPSYS 85
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXP 680
PPP P P P PP P PP P P SP P
Sbjct: 47 PPPICPPQFCPPPPMCP---PPPPPPPPPMCPPPPPPMPSYSPCQSYAP 92
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PPP P P + PP PP P P P P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 714 XPXASGRXXPRAP 752
P G P AP
Sbjct: 786 PPPPPGMFAPMAP 798
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PP P P P PP PP P P P S P P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 714 XPXASG 731
P G
Sbjct: 774 PPPPGG 779
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPX----PPXPLTPXXXXXPXXSPXPXXXPXXPSAXX 701
PPP P P P S PP P PP P P P P P A
Sbjct: 742 PPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Query: 702 XPXXXP 719
P P
Sbjct: 800 IPDYLP 805
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PPP P P + PP PP P P P P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 714 XPXASGRXXPRAP 752
P G P AP
Sbjct: 786 PPPPPGMFAPMAP 798
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PP P P P PP PP P P P S P P P P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 714 XPXASG 731
P G
Sbjct: 774 PPPPGG 779
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPX----PPXPLTPXXXXXPXXSPXPXXXPXXPSAXX 701
PPP P P P S PP P PP P P P P P A
Sbjct: 742 PPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 799
Query: 702 XPXXXP 719
P P
Sbjct: 800 IPDYLP 805
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PPP P P + PP PP P P P P P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 714 XPXASGRXXPRAP 752
P G P AP
Sbjct: 369 PPPPPGMFAPMAP 381
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PP P P P PP PP P P P S P P P P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 714 XPXASG 731
P G
Sbjct: 357 PPPPGG 362
Score = 28.3 bits (60), Expect = 9.1
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPX----PPXPLTPXXXXXPXXSPXPXXXPXXPSAXX 701
PPP P P P S PP P PP P P P P P A
Sbjct: 325 PPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV 382
Query: 702 XPXXXP 719
P P
Sbjct: 383 IPDYLP 388
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PPP P P S + PP P PP L P P P A
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKL 670
Query: 714 XPXASGR 734
P GR
Sbjct: 671 PPAQDGR 677
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PPP P P S + PP P PP L P P P A
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKL 496
Query: 714 XPXASGR 734
P GR
Sbjct: 497 PPAQDGR 503
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/75 (25%), Positives = 20/75 (26%)
Frame = +3
Query: 528 SXPPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXP 707
S PPP P PP P P P +P P P P P P
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
Query: 708 XXXPXASGRXXPRAP 752
P P P
Sbjct: 181 RNPPRTPPSPIPPPP 195
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.56
Identities = 31/110 (28%), Positives = 34/110 (30%), Gaps = 14/110 (12%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXX--------PXPPXPL---TPXXXXXPXXSPXPXXXP 680
PPP P P + + PP P PP PL P P P P P
Sbjct: 471 PPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAP 530
Query: 681 XXPSAXXXPXXXP--XASGRXXPRAPRXXREL-GXXAARXSXRAXPXXPP 821
A P P A+G P P L G A S P PP
Sbjct: 531 LSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPP 580
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXP 680
PPP P P P PP P PP P P P P
Sbjct: 56 PPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQRPSFYP 104
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
P P P P P P P P P+ P P P P P P+ P
Sbjct: 204 PSPSGPPSPGPVDPSEDPK--PSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPT--RRPPG 259
Query: 714 XPXASGRXXPRAP 752
P R P P
Sbjct: 260 PPGPPTRRPPGPP 272
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 622 GXGGXGXXGGXXXXEXGXXGXXXXGXCGGG 533
G GG G GG G G G CGGG
Sbjct: 98 GGGGCGGGGGCGGGGGGGCGGGGGGGCGGG 127
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/64 (28%), Positives = 22/64 (34%)
Frame = +3
Query: 528 SXPPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXP 707
S PPP P P P + PP P P P+ P +P P P+ P
Sbjct: 175 SAPPPPRPPPQEPPKPVEQAAPPP--PPAPMPVPVEKAPEPVPAPVEQIAP-PPAPVQDP 231
Query: 708 XXXP 719
P
Sbjct: 232 APAP 235
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/89 (25%), Positives = 27/89 (30%), Gaps = 6/89 (6%)
Frame = +3
Query: 573 PXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPS--AXXXPXXXPXASG----R 734
P + PP P P P P P P P P P+ + P P +G
Sbjct: 138 PCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Query: 735 XXPRAPRXXRELGXXAARXSXRAXPXXPP 821
P AP E G P PP
Sbjct: 198 GAPGAPGGPGEPGASEQGGPGEPGPAGPP 226
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/85 (24%), Positives = 24/85 (28%), Gaps = 5/85 (5%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLT-----PXXXXXPXXSPXPXXXPXXPSAX 698
PP P +P P P PP P + P P +P P P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 699 XXPXXXPXASGRXXPRAPRXXRELG 773
P G P P R G
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPG 345
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/89 (25%), Positives = 27/89 (30%), Gaps = 6/89 (6%)
Frame = +3
Query: 573 PXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPS--AXXXPXXXPXASG----R 734
P + PP P P P P P P P P P+ + P P +G
Sbjct: 138 PCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Query: 735 XXPRAPRXXRELGXXAARXSXRAXPXXPP 821
P AP E G P PP
Sbjct: 198 GAPGAPGGPGEPGASEQGGPGEPGPAGPP 226
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/85 (24%), Positives = 24/85 (28%), Gaps = 5/85 (5%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLT-----PXXXXXPXXSPXPXXXPXXPSAX 698
PP P +P P P PP P + P P +P P P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 699 XXPXXXPXASGRXXPRAPRXXRELG 773
P G P P R G
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPG 355
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/89 (25%), Positives = 27/89 (30%), Gaps = 6/89 (6%)
Frame = +3
Query: 573 PXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPS--AXXXPXXXPXASG----R 734
P + PP P P P P P P P P P+ + P P +G
Sbjct: 138 PCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Query: 735 XXPRAPRXXRELGXXAARXSXRAXPXXPP 821
P AP E G P PP
Sbjct: 198 GAPGAPGGPGEPGASEQGGPGEPGPAGPP 226
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 4.0
Identities = 23/89 (25%), Positives = 27/89 (30%), Gaps = 6/89 (6%)
Frame = +3
Query: 573 PXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPS--AXXXPXXXPXASG----R 734
P + PP P P P P P P P P P+ + P P +G
Sbjct: 138 PCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Query: 735 XXPRAPRXXRELGXXAARXSXRAXPXXPP 821
P AP E G P PP
Sbjct: 198 GAPGAPGGPGEPGASEQGGPGEPGPAGPP 226
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/73 (24%), Positives = 20/73 (27%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PPP P + P P P P P SP P S P
Sbjct: 436 PPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPL 495
Query: 714 XPXASGRXXPRAP 752
P A+ P P
Sbjct: 496 PPIATPSSVPPPP 508
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXP--PXXPXPPXPLTPXXXXXPXXSPXP 668
PPP P P + + P P PP PL P P P P
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXP--PXXPXPPXPLTPXXXXXPXXSPXP 668
PPP P P + + P P PP PL P P P P
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPP 814
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/73 (24%), Positives = 20/73 (27%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXX 713
PPP P + P P P P P SP P S P
Sbjct: 443 PPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPL 502
Query: 714 XPXASGRXXPRAP 752
P A+ P P
Sbjct: 503 PPIATPSSVPPPP 515
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/63 (26%), Positives = 19/63 (30%)
Frame = +3
Query: 564 PXLPXSXXSXPPXXPXPPXPLTPXXXXXPXXSPXPXXXPXXPSAXXXPXXXPXASGRXXP 743
P P + PP P P P P P + P P P P P G P
Sbjct: 125 PKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGP-LGPPGPPGPEGPNGEPGNKGPAGP 183
Query: 744 RAP 752
P
Sbjct: 184 PGP 186
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = +3
Query: 534 PPPXXPXXXXPXLPXSXXS--XPPXXPXPPXPLTPXXXXXPXXSPXP 668
PP P P P S P P PP P P P +P P
Sbjct: 85 PPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSP 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,534,437
Number of Sequences: 27780
Number of extensions: 90533
Number of successful extensions: 875
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2636483976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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