Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_J23
(946 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 5e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.18
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.24
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.31
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.95
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.8
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 4.6
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 5.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 5.1
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 5.1
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 6.7
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 8.9
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 26 8.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.9 bits (89), Expect = 5e-04
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 849 PPPTPXXXPPPXPPXPXXXLXXXXPXPPPPP 941
PPP P PP PP P P PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Frame = +3
Query: 846 PPPPT---PXXXPPPXPPXPXXXLXXXXPXPPPPP 941
PPPP P P P P P + P PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 33.1 bits (72), Expect = 0.059
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPPP 938
P PP P PPP PP P PPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 833 PXXXPXPXNSXXXPPPSSPXPPXXXXXXXXXPXPPPXP 946
P P P PPP P PP P PPP P
Sbjct: 748 PIPVPPPAPIMGGPPP--PPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 873 PPPXPPXPXXXLXXXXPXPPPPP 941
PPP PP P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 861 PXXXPPPXPPXPXXXLXXXXPXPPPP 938
P PPP PP P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.41
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXP 896
P PPPP P PP PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXP 896
P + PPPP P PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 849 PPPTPXXXPPPXPPXPXXXLXXXXPXPPPPP 941
PP P PPP PP P PPPPP
Sbjct: 5 PPGNPP--PPPPPP---GFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.24
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 846 PPPPTPXXXPPPXPPXPXXXLXXXXPXPPPPP 941
PPPP P PP P PPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 852 PPTPXXXPPPXPPXPXXXLXXXXPXPPPPP 941
PP P P PP L P P PPP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 849 PPPTPXXXPPPXPPXPXXXLXXXXPXPPPPP 941
PP P PP PP L P PP P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 849 PPPTPXXXPPPXPPXPXXXLXXXXPXPPPPP 941
PP P PP PP P PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +3
Query: 846 PPPPTPXXXPPPXPPXPXXXLXXXXPXPPPP 938
PPP P P PP P P PP
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +3
Query: 846 PPPPTPXXXPPPXPPXPXXXLXXXXPXPPPPP 941
PPPP P P P PP PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +2
Query: 833 PXXXPXPXNSXXXPPPSSPXPP 898
P P P N PP+SP P
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRP 274
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 872 PPPSSPXPPXXXXXXXXXPXPPPXP 946
PPPSS P PPP P
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPP 317
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.31
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPPPP 941
P P PP P PP P P + P PPPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAP--PMPAGPPSAPPPP 1734
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 946 GXGGGGGXGXXXXXXXXGXGGXGGGXXXGVGGGGXXXXG 830
G G GG G GG GG G GGG G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFG 171
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -1
Query: 946 GXGG--GGGXGXXXXXXXXGXGGXGGGXXXGVGGG 848
G GG GG G GG GGG G GGG
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 946 GXGGG-GGXGXXXXXXXXGXGGXGGGXXXGVGGG 848
G GGG GG G GG GGG G GGG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLG-GFGGG 257
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 934 GGGXGXXXXXXXXGXGGXGGGXXXGVGGGG 845
GGG G GG GGG G GG G
Sbjct: 112 GGGHHGPLHGPHGGFGGRGGGRMGGRGGRG 141
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 940 GGGGGXGXXXXXXXXGXGGXGGGXXXGVGGG 848
GG GG G GG GGG GGG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGG 39
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +2
Query: 830 PPXXXPXPXNSXXXPP---PSSPXPPXXXXXXXXXPXPPP 940
P P P S PP PSS PP P PPP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.0 bits (47), Expect(2) = 4.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +3
Query: 876 PPXPPXPXXXLXXXXPXPPPPP 941
P PP P PPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPP 242
Score = 21.8 bits (44), Expect(2) = 4.6
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 855 PTPXXXPPPXPPXP 896
P+ PPP PP P
Sbjct: 184 PSDYNPPPPPPPPP 197
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 5.1
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = -1
Query: 409 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLSLPVRGTFR 230
TPS + + P +S L ++ E ++S SL S+DP+ STF SL T
Sbjct: 129 TPSSTESSSLLDPSSVSSA--ILPSSTSVEVSISS-SSLSSSDPLTSSTFSSLS-SSTSS 184
Query: 229 AAPEVPS 209
+ P V S
Sbjct: 185 SQPSVSS 191
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPP 935
P H PPPP PP P PPP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPP 935
P H PPPP PP P PPP
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPP 935
P H PPPP PP P PPP
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPP 935
P H PPPP PP P PPP
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPP 935
P H PPPP PP P PPP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPP 935
P H PPPP PP P PPP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPP 935
P H PPPP PP P PPP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPP 935
P H PPPP PP P PPP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 831 PXXHXPPPPTPXXXPPPXPPXPXXXLXXXXPXPPP 935
P H PPPP PP P PPP
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 946 GXGGGGGXGXXXXXXXXGXGGXGGGXXXGVGG 851
G GG G G GG GGG G GG
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 406 PSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRS 296
PS + PG VP +S P S S + A+LSL S
Sbjct: 310 PSPADTPGFNVPSLISDDPSVSSSLSSSVASLSLQNS 346
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 849 PPPTPXXXPPPXPPXP 896
PPP P PPP PP P
Sbjct: 806 PPPAPL--PPPAPPLP 819
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 849 PPPTPXXXPPPXPPXP 896
PP TP PP PP P
Sbjct: 263 PPQTPISMSPPIPPTP 278
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 840 HXPPPPTPXXXPPPXPPXP 896
H PPPP P PP P
Sbjct: 743 HPPPPPVRSSISPSMPPAP 761
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,180,418
Number of Sequences: 5004
Number of extensions: 34747
Number of successful extensions: 339
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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