Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_J18
(939 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.014
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.058
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.077
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.23
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.23
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.41
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.54
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.95
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 1.00
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 27 2.9
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 2.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.8
SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces... 27 5.0
SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4 |S... 27 5.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.7
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.1 bits (77), Expect = 0.014
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = +3
Query: 654 PPPPPPXXXXXSXLXPPXXPPPXXSLPPPXXXXXPXXPPXXXXXXXXXXXXXXXXRXXXL 833
PP P S L PP PP S+PPP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP-----AQPA 178
Query: 834 XPAXXPPXLXXXXXXAPPXSRXPPPXP 914
P PP PP PP P
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 30.3 bits (65), Expect = 0.41
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 626 DFRPSFXXXXPPSPPRPXXXXPPPTPPXXSPXXLS-PPPXXXRSPPXSP 769
+ RP PS P P PP P P S PPP +P SP
Sbjct: 136 ELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.1 bits (72), Expect = 0.058
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -1
Query: 768 GXXGGXRXXXGGGERXXGEXXGGVGGGXXXXGRGGEGGXXXXXEGRKSS 622
G G R GG G GG GG RGG GG GR S
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGS 60
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 769 GGXXGXXXXXGGGREXXGGGXXGGXRXXXXXXXGGGGGG 653
GG G GGR GGG GG R GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGG-RGGARGGGRGGARGGRGG 49
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = -1
Query: 768 GXXGGXRXXXGGGERXXGEXXGGVGGGXXXXG--RGGEGGXXXXXEGRK 628
G GG GG G GG GG G RGG GG G K
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 756 GXRXXXGGGERXXGEXXGGVGGGXXXXGRGGEGGXXXXXEGR 631
G R GG GG GGG GG GG GR
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR 50
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = -2
Query: 938 GXGGGTGGXXG--XGXAGXXGGGGXARXEXXGXXGGXXXPGAXGXER 804
G GG GG G G G GG G AR G G G G R
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGAR--GGGRGGARGGRGGRGGAR 54
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 938 GXGGGTGGXXGXGXAGXXGGGGXARXEXXGXXGG 837
G GG GG G G G GG G + G GG
Sbjct: 39 GRGGARGGRGGRG--GARGGRGGSSGGRGGAKGG 70
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.077
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 656 PPSPPRPXXXXPPPTPPXXSPXXLSPPPXXXRSPPXS 766
P PP P PPP PP PPP P S
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 654 PPPPPPXXXXXSXLXPPXXPPPXXS 728
PPPPPP + PP PPP S
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 29.9 bits (64), Expect = 0.54
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 654 PPPPPPXXXXXSXLXPPXXPPP 719
PPPPPP PP PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 654 PPPPPPXXXXXSXLXPPXXPPPXXSLPPPXXXXXPXXPP 770
PPPPPP + + P P P PP P PP
Sbjct: 732 PPPPPP-----AVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +2
Query: 659 PSPPRPXXXXPPPTPPXXSPXXLSPPPXXXRSPPXSP 769
P+P PPP P P PPP + P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +2
Query: 659 PSPPRPXXXXPPP--TPPXXS-PXXLSPPPXXXRSPPXSP 769
P+PP P PPP PP + P PPP S P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 654 PPPPPPXXXXXSXLXPPXXPPPXXSLPPPXXXXXPXXPP 770
PP P P PPP PPP P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 657 PPPPPXXXXXSXLXPPXXPPPXXSLPPP 740
PPPPP PP P + PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 849 PPXLXXXXXXAPPXSRXPPPXPXPRPXSXP 938
PP + PP S PPP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 656 PPSPPRPXXXXPPPTPPXXSPXXLSP 733
PP P P PPP P +P +P
Sbjct: 1721 PPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +2
Query: 656 PPSPPRPXXXXP-PPTPPXXSPXXLSPPPXXXRSPPXSP 769
P S P P PP PP P S PP PP +P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPP-MPAGPPSAP 1731
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.23
Identities = 26/96 (27%), Positives = 28/96 (29%), Gaps = 5/96 (5%)
Frame = +3
Query: 654 PPPPPPXXXXXSXLXPPXXPPPXXSLPP-PXXXXXPXXPPXXXXXXXXXXXXXXXXRXXX 830
P PPP + PP S PP P P P
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 831 LXP-AXXPPXLXXXXXXAPPX---SRXPPPXPXPRP 926
L P A P L APP + PPP P P P
Sbjct: 449 LPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 28.7 bits (61), Expect = 1.2
Identities = 29/102 (28%), Positives = 30/102 (29%), Gaps = 3/102 (2%)
Frame = +3
Query: 642 SXXXPPPPPPXXXXXSXLXPPXXPPPXXSLPPPXXXXXPXXPPXXXXXXXXXXXXXXXXR 821
S PPPPPP + PP S PPP PP R
Sbjct: 334 SSLPPPPPPPRSNAAGSI---PLPPQGRSAPPP-------PPPRSAPSTGRQPPPLSSSR 383
Query: 822 XXXLXPAXXPPXLXXXXXXAPP---XSRXPPPXPXPRPXSXP 938
PA P PP SR P P P P S P
Sbjct: 384 AVSNPPAPPPAIPGRSAPALPPLGNASRTSTP-PVPTPPSLP 424
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 635 PSFXXXXPPSPPRPXXXXPPPTPPXXSPXXLSPP-PXXXRSPPXSP 769
PS P +PP P P PP + +PP P +PP +P
Sbjct: 437 PSLPMGAPAAPPLP--PSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +2
Query: 659 PSPPRPXXXXPPPTPPXXSPXXLSPPPXXXRSPPXSP 769
P+PP PP PP P P PP +P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 656 PPSPPRPXXXXPPPTPPXXSPXXLSPPPXXXRSPP 760
PPS P PP+ P +P PP +PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 25.8 bits (54), Expect = 8.8
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +2
Query: 656 PPSPPRPXXXXPPPTPPXXS---PXXLSPPP-XXXRSPPXSP 769
PP PP PP P S P + PP SPP SP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +2
Query: 635 PSFXXXXPPSPPRPXXXXPPPTPPXXSPXXLSPP-PXXXRSPPXSP 769
PS PPS P P PP ++PP P + P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.41
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 654 PPPPPPXXXXXSXLXPPXXPPP 719
PPPPPP PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 630 SALXSXXXPPPPPPXXXXXSXLXPPXXPP 716
++L PPPPPP PP PP
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 674 PXXXXPPPTPPXXSPXXLSPPP 739
P PPP PP P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.54
Identities = 27/83 (32%), Positives = 27/83 (32%)
Frame = -1
Query: 903 GEXGMXGGRXXSXXXGXGGXXRGXGXXXXXXXXXXXXXXXXXGXXGXXGGXRXXXGGGER 724
G G GG G GG G G G G GG GGG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFG-GFGGFGGEGHHHGGHGGFGGGPGGFEGGP-GGFGGGPG 245
Query: 723 XXGEXXGGVGGGXXXXGRGGEGG 655
G GG GGG G GG GG
Sbjct: 246 GFGGGLGGFGGGPGGFG-GGPGG 267
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -2
Query: 938 GXGGGTGG-XXGXGXAGXXGGGGXARXEXXGXXGGXXXPG 822
G GGG+GG G G G GG G G G PG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 768 GXXGGXRXXXGGGERXXGEXXGGVGGGXXXXGRGGEG 658
G GG GGG G GG GGG G GG G
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGG--PGGHGGPG 272
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.95
Identities = 22/96 (22%), Positives = 26/96 (27%), Gaps = 3/96 (3%)
Frame = +2
Query: 659 PSPPRPXXXXPPPTPPXXSPXX---LSPPPXXXRSPPXSPXXXXXXXXXXXXXXXXSXXX 829
PS P P P P P P ++ PP S P +
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPV 1133
Query: 830 PXPRXXPPXPXXXLXXRPPXIPXSPXXXXPPSXLXP 937
P P PP P + P P PS P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Score = 27.5 bits (58), Expect = 2.9
Identities = 20/88 (22%), Positives = 22/88 (25%)
Frame = +2
Query: 659 PSPPRPXXXXPPPTPPXXSPXXLSPPPXXXRSPPXSPXXXXXXXXXXXXXXXXSXXXPXP 838
PS P P PP P P P P +P S P P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 839 RXXPPXPXXXLXXRPPXIPXSPXXXXPP 922
P P +P P PP
Sbjct: 1087 APSGIPPVPKPSVAAPPVP-KPSVAVPP 1113
Score = 27.5 bits (58), Expect = 2.9
Identities = 23/95 (24%), Positives = 27/95 (28%), Gaps = 3/95 (3%)
Frame = +2
Query: 662 SPPRPXXXXPPPTPPXXSPXXLSPPPXXXRSPPXSPXXXXXXXXXXXXXXXXSXXXPXPR 841
+PP P PP P S +PPP P S S P P+
Sbjct: 1040 APPVPIPTSTPPVPKSSSGAPSAPPPV---PAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 842 ---XXPPXPXXXLXXRPPXIPXSPXXXXPPSXLXP 937
PP P + P P PS P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +2
Query: 659 PSPPRPXXXXPPPTPPXXSPXXLSPPPXXXRSPPXS 766
P P+P PP PP +P P PP S
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/88 (22%), Positives = 25/88 (28%)
Frame = +2
Query: 659 PSPPRPXXXXPPPTPPXXSPXXLSPPPXXXRSPPXSPXXXXXXXXXXXXXXXXSXXXPXP 838
PS P P PP P +PP +P +P S P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPP---VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Query: 839 RXXPPXPXXXLXXRPPXIPXSPXXXXPP 922
+ P P +P P PP
Sbjct: 1183 KPAAGVPPVPPPSEAPPVP-KPSVGVPP 1209
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.8 bits (49), Expect(2) = 1.00
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 654 PPPPPPXXXXXSXLXPPXXPPPXXSLPP 737
P PP + P PPP +LPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 23.4 bits (48), Expect(2) = 1.00
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 630 SALXSXXXPPPPPP 671
++L S PPPPPP
Sbjct: 181 TSLPSDYNPPPPPP 194
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 148 AALIKLRHMPLVQRSIWNHFNKVSRNISTSKK 243
AAL LRH+PL QR + + ++ N + KK
Sbjct: 1231 AALKSLRHLPLSQRILDANVTRLPSNFTDDKK 1262
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 769 GGXXGXXXXXGGGREXXGGGXXGGXRXXXXXXXGGGGGG 653
GG G GG R GG GG GGG G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRG 176
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = -2
Query: 938 GXGGGTGGXXGXGXAGXXGG--GGXARXEXXGXXGG 837
G GG GG G G GG GG G GG
Sbjct: 146 GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 656 PPSP-PRPXXXXPPPTPPXXSPXXLSPPP 739
PP+P P P PP PP S S PP
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 657 PPPPPXXXXXSXLXPPXXPPPXXSLPPPXXXXXPXXPP 770
PPPPP S PP S P P PP
Sbjct: 744 PPPPPVRSSISPSMPPAPLTHANSSTPMNYVSQPESPP 781
>SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +1
Query: 67 LYLSDKYNLKVIRRVQSVNLRIVVFRMAALIKLRHMPLVQRSIWNHFNKVSRNISTSKKN 246
++L + ++ KVI +Q + +VVF+ +LIK R + Q + HF ++ ++ S +
Sbjct: 222 IFLINSFHSKVITSIQDLEDYMVVFK--SLIKSREQKVKQ---FEHFQQIVQSNSNNPDQ 276
Query: 247 S 249
S
Sbjct: 277 S 277
>SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 289 KNWVXYGFDYTSKEEDTNAHH 351
KNWV F +S+++D HH
Sbjct: 67 KNWVRQPFSISSRKDDFTLHH 87
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Frame = +2
Query: 656 PPSPPRPXXXXPPPTPPXXSPXXLSP------PPXXXRSPPXS 766
PP+ + PPT SP LSP PP R PP S
Sbjct: 1023 PPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLPPVS 1065
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,809,069
Number of Sequences: 5004
Number of extensions: 53608
Number of successful extensions: 423
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 477327454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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