Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_J18
         (939 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.99 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.99 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   7.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.0  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.99
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 37  KILNQLANIILYLSDKYNLKVIRRVQSVNLRIVVFRMAALIKLRHMP 177
           K LN L NII   +D YN +    + ++  +I+ + + A  K + +P
Sbjct: 357 KGLNILGNIIEGNADSYNTEFYGSIDTLARKILGYNLEAASKYQIVP 403


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.99
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 37  KILNQLANIILYLSDKYNLKVIRRVQSVNLRIVVFRMAALIKLRHMP 177
           K LN L NII   +D YN +    + ++  +I+ + + A  K + +P
Sbjct: 357 KGLNILGNIIEGNADSYNTEFYGSIDTLARKILGYNLEAASKYQIVP 403


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 662 SPPRPXXXXPPPTPPXXSP 718
           SPP P    PP  PP   P
Sbjct: 38  SPPNPSQGPPPGGPPGAPP 56


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 352 ATFFFSVTLCIVFGGVCWAYSPXCTH 429
           A FFF+ T  +V   VC+ ++   TH
Sbjct: 148 AMFFFAATSLLVVAEVCY-FTAHVTH 172


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +3

Query: 591  SPLSXTYGLCXTTSALXSXXXPPPPPP 671
            S +   Y     T+       PPPPPP
Sbjct: 1336 SSIDSDYSTLERTAWRQQQPPPPPPPP 1362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,612
Number of Sequences: 438
Number of extensions: 6273
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30718506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)