Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_J07
         (891 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D88460-1|BAA20128.1|  505|Homo sapiens N-WASP protein.                 32   2.4  
BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich syndrom...    31   7.4  
AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.              31   7.4  

>D88460-1|BAA20128.1|  505|Homo sapiens N-WASP protein.
          Length = 505

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 21/64 (32%), Positives = 25/64 (39%)
 Frame = +1

Query: 442 PSRPXVDRPTKPQPNCIX*LXXXXXPDXLLPSXPPXXENKXFTPTXLSXPXTTPPXPXXT 621
           PSRP V+ P  P PN +        P    PS PP           ++ P   PP P   
Sbjct: 327 PSRPSVEVPPPP-PNRMYPPPPPALPSSA-PSGPPPPPPSVLGVGPVAPPPPPPPPPPPG 384

Query: 622 PPXP 633
           PP P
Sbjct: 385 PPPP 388


>BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich
           syndrome-like protein.
          Length = 505

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = +1

Query: 442 PSRPXVDRPTKPQPNCIX*LXXXXXPDXLLPSXPPXXENKXFTPTXLSXPXTTPPXPXXT 621
           PSRP V  P  P PN +        P    PS PP           ++ P   PP P   
Sbjct: 327 PSRPSVAVPPPP-PNRMYPPPPPALPSSA-PSGPPPPPPSVLGVGPVAPPPPPPPPPPPG 384

Query: 622 PPXP 633
           PP P
Sbjct: 385 PPPP 388


>AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.
          Length = 505

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = +1

Query: 442 PSRPXVDRPTKPQPNCIX*LXXXXXPDXLLPSXPPXXENKXFTPTXLSXPXTTPPXPXXT 621
           PSRP V  P  P PN +        P    PS PP           ++ P   PP P   
Sbjct: 327 PSRPSVAVPPPP-PNRMYPPPPPALPSSA-PSGPPPPPPSVLGVGPVAPPPPPPPPPPPG 384

Query: 622 PPXP 633
           PP P
Sbjct: 385 PPPP 388


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,172,852
Number of Sequences: 237096
Number of extensions: 1442870
Number of successful extensions: 4405
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4283
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)