Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_J05
         (936 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.3  
07_01_0654 - 4900509-4900518,4900626-4900709,4900844-4901377,490...    29   7.0  
03_01_0515 - 3864796-3865425                                           29   7.0  
08_01_0304 - 2502760-2502774,2502844-2502921,2503035-2503103,250...    28   9.3  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    28   9.3  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/44 (29%), Positives = 14/44 (31%)
 Frame = +2

Query: 761 PXPXXNPPXPPXXXXXXLXXXPXXXPXPXXPXPXXXXXXXRXPP 892
           P P   PP PP          P   P P  P P       + PP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPP 587


>07_01_0654 -
           4900509-4900518,4900626-4900709,4900844-4901377,
           4901462-4901619,4901703-4901832,4901918-4901999,
           4902097-4902230,4902314-4902410,4902512-4902788,
           4902881-4903024
          Length = 549

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +2

Query: 122 AGTNFSNEIRT*QMFTIDFHGEGITSC-NRNQTRKIIICVTTGGRTYCESARVGTTALPI 298
           +GT+   +    ++  +D  G GIT+C   N+ +K    +  G   +  + RV      +
Sbjct: 29  SGTSKRRDFTALELILVDEEGVGITACVGENEIQKFSTSIVEGHAYFLRNFRVSRQTKKL 88

Query: 299 SAV 307
           +AV
Sbjct: 89  NAV 91


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 17/59 (28%), Positives = 17/59 (28%)
 Frame = +1

Query: 760 PPXXXXSPXPPXXXXXSPXGPPXPXXXXXXPXPXXXXXXXPXXXPXXXXXXPPXXXXXP 936
           PP    SP PP      P  PP P      P P       P   P      PP     P
Sbjct: 54  PPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPP---PLPPPPPPPAASPPPPPPSPPPP 109


>08_01_0304 -
           2502760-2502774,2502844-2502921,2503035-2503103,
           2503200-2503289,2503400-2503517,2505548-2505678,
           2505756-2506025,2507175-2507308,2507635-2508088
          Length = 452

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +2

Query: 95  RCTGVRIPRAGTNFSNEIRT*QMFTIDFHGE 187
           RCTGV I   G N   +I T      DFHGE
Sbjct: 159 RCTGVVIGWDGANKRAKILTAASVVCDFHGE 189


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 16/56 (28%), Positives = 18/56 (32%)
 Frame = +1

Query: 691  PLNTNNXXXXXFPXSXGXXXXXXPPXXXXSPXPPXXXXXSPXGPPXPXXXXXXPXP 858
            P N +       P   G      PP    +P PP      P GPP P      P P
Sbjct: 1175 PPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGV-PGGPPPPPGGRGLPAP 1229


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,841,876
Number of Sequences: 37544
Number of extensions: 475172
Number of successful extensions: 1289
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)