Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_J01
(914 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.014
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.024
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.032
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.073
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.13
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.30
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.53
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.53
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.70
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 1.6
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 28 1.6
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 2.8
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.7
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 24 5.9
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.5
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 26 6.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 6.5
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 8.6
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 26 8.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.014
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 786 PPPPXXAXXXTTPPPXPLPXPXPPP 860
PPPP A TP P P+P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 32.3 bits (70), Expect = 0.099
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Frame = +2
Query: 773 PXPXPPPPPXRXXXHHPPPXP-----XPXPXPPP 859
P P PPP P PPP P P P PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 32.3 bits (70), Expect = 0.099
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 779 PXPPPPPXRXXXHHPPPXPXPXP 847
P PPPPP PPP P P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 777 PPXPPPPXXAXXXTTPPPXPLP 842
PP PPPP A PPP P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Frame = +2
Query: 773 PXPXPPPPPXRXXXHHPPPXPXP-----XPXPPP 859
P P P PPP PPP P P P PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = +3
Query: 645 PPSALXPPXXPXXRP*PXPFXPPXXIDXXXXXXXXXXXXXXKXXPPXPPPPXXAXXXTTP 824
PP P P P P PP I PP PPPP +
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 825 PPXPLPXPXPPP 860
P P P P
Sbjct: 792 YYAPAPQAEPEP 803
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.3 bits (75), Expect = 0.024
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = -3
Query: 909 GGXGGRGXGGXXGXXXWGGGXGXGXGXGGGWWXXXRXGGGGGXG 778
G GGRG G G +GGG G G G G R G GG G
Sbjct: 13 GSRGGRG-GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -3
Query: 909 GGXGGR-GXGGXXGXXXWGGGXGXGXGXGG-GWWXXXRXGGGGGXG 778
G GGR G GG G GG G G GG G R G GG G
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 29.5 bits (63), Expect = 0.70
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -3
Query: 909 GGXGGRGXGGXXGXXXWGGGXGX-GXGXGG--GWWXXXRXGGGGGXG 778
G GGRG G G + GG G G G GG G GG GG G
Sbjct: 6 GSRGGRG-GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 25.8 bits (54), Expect = 8.6
Identities = 19/43 (44%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 909 GGXGG-RGXGGXXGXXXWGGGXGXGXGXGGGWWXXXRXGGGGG 784
GG GG RG GG G GG G G GG R G GG
Sbjct: 30 GGRGGARG-GGRGGARGGRGGRGGARGGRGG-SSGGRGGAKGG 70
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.032
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -3
Query: 909 GGXGGRGXGGXXGXXXWGGG-XGXGXGXGG-GWWXXXRXGGGGGXGXGXW 766
GG GG G G +GGG G G G GG G GG GG G W
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 909 GGXGGRGXGGXXGXXXWGGGXGXGXGXGG-GWWXXXRXGGGGGXGXG 772
GG GG G GG G GG G G G GG G GG GG G G
Sbjct: 221 GGHGGFG-GGPGGFE--GGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = -3
Query: 909 GGXGGRGXGGXXGXXXWGGGXGXGXGXGGGWWXXXRXGGGGGXGXG 772
GG GG G G +GGG G G GG+ GGG G G
Sbjct: 211 GGFGGEGH-HHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Score = 29.5 bits (63), Expect = 0.70
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 906 GXGG-RGXGGXXGXXXWGGGXGXGXGXGGGWWXXXRXGGGGGXG 778
G GG G GG G GG G G G G G + G GGG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHG-GFGGGPGGFEGGPGGFGGGPG 245
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/92 (23%), Positives = 26/92 (28%)
Frame = +3
Query: 588 PTTXXPXPXXRNPQPXXXXPPSALXPPXXPXXRP*PXPFXPPXXIDXXXXXXXXXXXXXX 767
PT P +P P P +A P P P PP ++
Sbjct: 156 PTVSAPNSMV-SPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYS 214
Query: 768 KXXPPXPPPPXXAXXXTTPPPXPLPXPXPPPT 863
P P P P P P PPPT
Sbjct: 215 SGRAVSPEIPP-TYTPKQADPLPAPPPPPPPT 245
Score = 26.2 bits (55), Expect(2) = 0.073
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 772 PXPPPPPPP 798
P PPPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 772 PXPPPPPPP 798
P PPPPPPP
Sbjct: 236 PAPPPPPPP 244
Score = 25.8 bits (54), Expect = 8.6
Identities = 24/84 (28%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Frame = +3
Query: 630 PXXXXPPSALXPPXX--PXXRP*PXPFXPPXXIDXXXXXXXXXXXXXX-KXXPPXPPP-- 794
P PPSA P P P P PP D + P PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTY 227
Query: 795 -PXXAXXXTTPPPXPLPXPXPPPT 863
P A PPP P P P T
Sbjct: 228 TPKQADPLPAPPPPPPPTLPPQST 251
Score = 25.0 bits (52), Expect(2) = 0.073
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 874 PXPPXPPPPXTP 909
P PP PPPP P
Sbjct: 236 PAPPPPPPPTLP 247
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 767 QXPXPXPPPPPXRXXXHHPPPXPXPXPXPPPHXXXP 874
Q P PPPPP PPP P P PP P
Sbjct: 1701 QMSAPTPPPPPMSVP---PPPSAPPMPAGPPSAPPP 1733
Score = 29.1 bits (62), Expect = 0.92
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 777 PPXPPPPXXAXXXTTPPPXPLPXPXPPP 860
P PPPP + PP P P PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 794 PPXRXXXHHPPPXPXPXPXPPPHXXXP 874
PP R PP P P PPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPP 1716
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 777 PPXPPPPXXAXXXTTPPPXPLPXPXPP 857
PP PP A + PPP PLP P
Sbjct: 1716 PPPSAPPMPAGPPSAPPP-PLPASSAP 1741
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.30
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 779 PXPPPPPXRXXXHHPPPXPXP 841
P PPPPP PPP P P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.92
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 779 PXPPPPPXRXXXHHPPPXPXPXPXP 853
P PPPP PP P P P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 773 PXPXPPPPPXRXXXHHPPPXP 835
P P PPPP PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 777 PPXPPPPXXAXXXTTP-PPXPLPXPXPPP 860
PP PPPP + P PP P PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/86 (24%), Positives = 26/86 (30%), Gaps = 7/86 (8%)
Frame = +3
Query: 624 PQPXXXXPPSALXPPXXPXXRP*PXPFXPPXXIDXXXXXXXXXXXXXXKXX-PPXPPPPX 800
P P P + PP R P PP I + PP P PP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 801 X------AXXXTTPPPXPLPXPXPPP 860
+ + PP P+ P PP
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/78 (23%), Positives = 22/78 (28%)
Frame = +3
Query: 627 QPXXXXPPSALXPPXXPXXRP*PXPFXPPXXIDXXXXXXXXXXXXXXKXXPPXPPPPXXA 806
+P P S + + P P PP + PP PP A
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
Query: 807 XXXTTPPPXPLPXPXPPP 860
PP P PPP
Sbjct: 349 GSIPLPPQGRSAPPPPPP 366
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 773 PXPXPPPPPXRXXXHHPPPXPXPXPXPP 856
P P P PPP PP P P P P
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSP-PRPIAP 277
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 773 PXPXPPPPPXRXXXHHPPPXPXPXPXPP 856
P P PP PPP P P P P
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 773 PXPXPPPPPXRXXXHHPPPXPXPXPXPPP 859
P P PP PP P P PPP
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.53
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -3
Query: 909 GGXGGRGXGGXXGXXXWGGGXGXGXGXGGGWWXXXRXGGGG 787
GG GG GG G G G G G GG+ R G G
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 906 GXGGRGXGGXXGXXXWGGGXGXGXGXGGGWWXXXRXGGGGGXGXG 772
G GRG G G G G GG+ R G GGG G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -3
Query: 909 GGXGG-RGXGGXXGXXXWGGGXGXGXGXG--GGWWXXXRXGGGGG 784
GG GG RG G +GGG G G G GG R G GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Frame = -3
Query: 906 GXGGRGX--GGXXGXXX-WGGGXGXGXGXG--GGWWXXXRXGGGGGXGXG 772
G GGRG GG G +GG G G G GG+ R G GG G
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.70
Identities = 27/99 (27%), Positives = 30/99 (30%), Gaps = 4/99 (4%)
Frame = +3
Query: 576 PAP*PTTXXPXPXXRNPQPXXXXPPSALXPPXXPXXRP*PXPFXPPXXIDXXXXXXXXXX 755
P P P+ P P P P S + P P P P PP
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP--PP---------SEAPP 1199
Query: 756 XXXXKXXPPXPPPPXXAXXXTTP----PPXPLPXPXPPP 860
P PPP A TP PP P+P PP
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 28.3 bits (60), Expect = 1.6
Identities = 24/98 (24%), Positives = 26/98 (26%), Gaps = 3/98 (3%)
Frame = +3
Query: 576 PAP*PTTXXPXPXXRNPQPXXXXPPSALXPPXXPXXRP*PXPFXPPXXIDXXXXXXXXXX 755
P P P+ P P P P A+ P P P P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPV 1142
Query: 756 XXXXKXXPPXPPP---PXXAXXXTTPPPXPLPXPXPPP 860
PP P P P PP P P PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +2
Query: 779 PXPPPP-PXRXXXHHPPPXPXPXPXPPPHXXXP 874
P PP P P HHPPP P P P
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -3
Query: 909 GGXGGRGXGGXXGXXXWGGGXGXGXGXGGG 820
GG G GG G +GG G G G G G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 858 GGGXGXGXGXGGGWWXXXRXGGGGGXGXG 772
GG G G GG R G GGG G G
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 119 TPKIIETVQPTSLQPVLD 66
+PK++ETVQ T +QP +D
Sbjct: 246 SPKLLETVQSTIIQPTID 263
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/15 (73%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = +3
Query: 822 PPPXPLPXPXPP-PT 863
PPP PLP P PP PT
Sbjct: 806 PPPAPLPPPAPPLPT 820
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 260 NDCFTDEECLLSVNSLRQHHMRLAGFKDLGYSFV 361
N FTDE+ + V LRQ ++ L FK L F+
Sbjct: 162 NLSFTDEDVSIIVRRLRQSNVILPNFKALSADFM 195
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +3
Query: 522 PSGPATNXLTDXXHXVGHPAP*PTTXXPXPXXRNPQPXXXXP-PSALXPPXXP 677
PS PA P P+ P P P P P PS+L PP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 26.2 bits (55), Expect = 6.5
Identities = 21/90 (23%), Positives = 25/90 (27%)
Frame = +3
Query: 588 PTTXXPXPXXRNPQPXXXXPPSALXPPXXPXXRP*PXPFXPPXXIDXXXXXXXXXXXXXX 767
P+ P +P PP PP P P P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP-PIPSKAPPI--------PSSLPPPA 175
Query: 768 KXXPPXPPPPXXAXXXTTPPPXPLPXPXPP 857
+ P PP + PP P P PP
Sbjct: 176 QPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.8 bits (49), Expect(2) = 5.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 778 PPPPPPP 798
PPPPPPP
Sbjct: 1095 PPPPPPP 1101
Score = 20.6 bits (41), Expect(2) = 5.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 880 PPXPPPP 900
PP PPPP
Sbjct: 1096 PPPPPPP 1102
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 772 PXPPPPPPP 798
P PPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 779 PXPPPPPXRXXXHHPPPXP 835
P PPPPP H P P
Sbjct: 370 PPPPPPPPELLNHSPKSRP 388
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 772 PXPPPPPPP 798
P PPPPPPP
Sbjct: 945 PPPPPPPPP 953
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 25.8 bits (54), Expect = 8.6
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Frame = +2
Query: 230 DLVVIQHTVSNDCFTDEE---CL----LSVNSLRQHHMR-LAGFKDLGYSFVAG 367
+L ++ + + NDCFT E CL LS N L + + F DL + FV+G
Sbjct: 810 ELYLVDNRLGNDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSG 863
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 25.8 bits (54), Expect = 8.6
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 278 EECLLSVNSLRQHHMRLAGFKDLGYSFVAGGXGKIYEGAGWNHIXAHTLXYNNIS 442
E+ + V L+Q + + G + G SF +Y AGW+HI + L +N S
Sbjct: 108 EQLVRRVCDLKQGYTQYGGLRPFGVSF-------LY--AGWDHIRGYQLFQSNPS 153
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,976,876
Number of Sequences: 5004
Number of extensions: 60513
Number of successful extensions: 610
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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