Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_I24
         (944 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145...    83   4e-16
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353...    83   4e-16
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904...    30   2.3  
05_07_0285 + 28982502-28982782,28982888-28982989,28983189-289840...    28   9.4  

>07_01_1143 -
           10711023-10711884,10713603-10713826,10714253-10714522,
           10715071-10715175
          Length = 486

 Score = 82.6 bits (195), Expect = 4e-16
 Identities = 33/59 (55%), Positives = 39/59 (66%)
 Frame = +1

Query: 280 WEDADXPILCXTCLGDXPYIRMTXXKYGKECKICSRPXTVXRWCPGAXMRLXKXXXCPT 456
           WE +D PI+C +CLGD PY+RM   +Y KECKIC+RP TV RW PG   R  K   C T
Sbjct: 14  WERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICQT 72


>06_01_0493 -
           3536207-3537056,3537603-3537826,3538234-3538503,
           3539042-3539146
          Length = 482

 Score = 82.6 bits (195), Expect = 4e-16
 Identities = 33/59 (55%), Positives = 39/59 (66%)
 Frame = +1

Query: 280 WEDADXPILCXTCLGDXPYIRMTXXKYGKECKICSRPXTVXRWCPGAXMRLXKXXXCPT 456
           WE +D PI+C +CLGD PY+RM   +Y KECKIC+RP TV RW PG   R  K   C T
Sbjct: 14  WERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGRDARYKKTEICQT 72


>03_02_0514 +
           9038606-9039790,9040211-9040432,9040548-9040655,
           9041608-9041802,9041905-9042153,9042525-9042672,
           9042673-9042779,9043311-9043475,9044506-9045948
          Length = 1273

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 942 GGGWXEXDGGGXGGGXG 892
           GGGW    GGG GGG G
Sbjct: 103 GGGWGAGGGGGGGGGGG 119


>05_07_0285 +
           28982502-28982782,28982888-28982989,28983189-28984006,
           28984594-28985050,28985203-28985242
          Length = 565

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 220 IXKGHAMATSKSTNTYNRQNWEDADXPILCXTCLGD 327
           I KG  +AT+ +TN Y RQ +++    I    C  D
Sbjct: 148 ITKGGILATTATTNLYRRQRYKEGMKDIQSQCCSPD 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,947,811
Number of Sequences: 37544
Number of extensions: 225445
Number of successful extensions: 2734
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2556
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)