BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_I23
(970 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 43 7e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 41 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 5e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 40 7e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.015
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.026
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 33 0.060
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.24
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.43
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.62
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.75
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 1.3
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 28 1.7
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.3
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.0
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 5.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 7.7
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 9.2
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 9.2
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 26 9.2
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 9.2
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 9.2
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 42.7 bits (96), Expect = 7e-05
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXP-PGXRPPPPXPXXXXP 633
P PPPPP P PP PP P PPPP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 34.7 bits (76), Expect = 0.020
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXPXP-XPPXPPPP 968
PP P PPPP P P PP PPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 33.5 bits (73), Expect = 0.046
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +1
Query: 526 PPPP---PPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXP 633
PPPP PPP P P PP PP P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 538 PPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXPP 636
PP P PP PP PP PP P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPP---PPSAPPMPAGPP 1728
Score = 29.9 bits (64), Expect = 0.56
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +3
Query: 888 PXPPXPXXXPPP-PPXXPXPXPPXPPPP 968
P PP PPP P P P PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.5 bits (63), Expect = 0.75
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXPXPXPPXPPP 965
PP PPPP P PP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 29.1 bits (62), Expect = 0.98
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +1
Query: 904 PPXXPPPPPXXPXP-XPPXPPPP 969
P PPPP P P PP PPP
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXPXPXPPXPPPP 968
P PPPPP P P PP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 916 PPPPPXXPXPXPPXPPPP 969
PPPPP P P PP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMP 1724
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPP 966
PP PP P P PP P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXPP 636
PP P PP P PP P P P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVP-PPPSAPPMPAGPPSAPPP 1733
Score = 26.2 bits (55), Expect = 6.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 525 PPPPXPPXPXPPXPXXP 575
P PP PP PP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAP 1721
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXPXPXPP---XPPPP 968
P P PP P P PP PPPP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXP 618
P PPP P PP PPP G PPPP P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPPGXRPPPPXP 618
PPP P P PP PPP PPPP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 36.3 bits (80), Expect = 0.006
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPP 591
PPPPPPP P PPP PP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.7 bits (76), Expect = 0.020
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 8/45 (17%)
Frame = +1
Query: 526 PPPPPP--------PXXXPXPPXPPPXXPPGXRPPPPXPXXXXPP 636
PPPPPP P P PP P P PPPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 34.3 bits (75), Expect = 0.026
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 907 PXXPPPPPXXPXPXPPXPPPP 969
P PPPPP PP PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 33.9 bits (74), Expect = 0.035
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 888 PXP-PXPXXXPPPPPXXPXPXPPXPPP 965
P P P P PPP P P PP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 33.5 bits (73), Expect = 0.046
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 6/31 (19%)
Frame = +3
Query: 894 PPXPXXX-PPPPPXXP-----XPXPPXPPPP 968
PP P PPPPP P P PP PPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.5 bits (73), Expect = 0.046
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPP 591
PPPPPPP PPP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.1 bits (72), Expect = 0.060
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
PP PPP P PP PPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.080
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
PP PPPP PP PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 897 PXPXXXPPPPPXXPXPXPPXPPPP 968
P P P PPP PP PPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 29.9 bits (64), Expect = 0.56
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPP 966
P PPP P P PP PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPP 768
Score = 29.5 bits (63), Expect = 0.75
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXPXPXPP------XPPPP 968
P PP P P P P P PP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP 764
Score = 29.1 bits (62), Expect = 0.98
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P P PPP PP PPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPP 767
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
Frame = +1
Query: 907 PXXPPPPPXXPXPXP-PXPPPP 969
P PPP P P P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPP 753
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXP----PPXXPPGXRPPPPXPXXXXPP 636
PP PPP P P P PP PP PP P P PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 33.1 bits (72), Expect = 0.060
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXP----PPXXPPGXRPPPPXPXXXXPP 636
PP P P P P P PP P PP P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 33.1 bits (72), Expect = 0.060
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXP----PPXXPPGXRPPPPXPXXXXPP 636
PP P P P P P PP P PP P P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 33.1 bits (72), Expect = 0.060
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXP----PPXXPPGXRPPPPXPXXXXPP 636
PP P P P P P PP P PP P P PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 32.7 bits (71), Expect = 0.080
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXP---PPXXPPGXRPPPPXPXXXXPP 636
PP P P P P P PP P PP P P PP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 31.1 bits (67), Expect = 0.24
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 502 SIXYXXXXPPPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXP 633
S+ PP PP P PP P PP P P P
Sbjct: 1204 SVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 29.9 bits (64), Expect = 0.56
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXP---PPXXPPGXRPPP-PXPXXXXPP 636
PP P P P P P PP P PP P P PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 29.9 bits (64), Expect = 0.56
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRP----PPPXPXXXXPP 636
PP P P P P P PP +P PP P PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 29.9 bits (64), Expect = 0.56
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPPGXRP----PPPXPXXXXPP 636
PP P P P PP PP +P PP P PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 29.5 bits (63), Expect = 0.75
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXPP 636
P PP P PP P PP P P PP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 5/41 (12%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPP-----GXRPPPPXPXXXXPP 636
PP P P P PP PP PP P P PP
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPPGXRPP---PPXPXXXXPP 636
PP P P P P P PP +P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXP---PPXXPPGXRPPPPXPXXXXPP 636
PP P P P P P PP P PP PP
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXP---PPXXPPGXRPPP-PXPXXXXP 633
PP P P P P P PP P PP P P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXPXPXPPXPPP 965
P P P PP P PP PPP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPP 966
PP PP P PP PPP
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXP---PPXXPPGXRPPP-PXPXXXXPP 636
P P P P P P PP P PP P P PP
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP 1113
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXP 633
PP P P P P P PP P P P
Sbjct: 1217 PPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXP 633
PP P P P P P PP PP P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPP-VPPPSEAPPVPKP 1203
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 39.5 bits (88), Expect = 7e-04
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPG 594
PPPPPPP P PPP PPG
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPG 31
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 541 PPXXXPXPPXPPPXXPPGXRPPPPXP 618
PP P PP PP PP PPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 36.7 bits (81), Expect = 0.005
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
PP PPPP P PP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 35.9 bits (79), Expect = 0.009
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
PP PPPPP P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 35.5 bits (78), Expect = 0.011
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXPXPXPPXPPPP 968
PP PPPPP P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 35.1 bits (77), Expect = 0.015
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXPXPXPPXPPPP 968
P P PPPP P PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.9 bits (69), Expect = 0.14
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXXPPGXRPPPPXP 618
PP P PP PPP P +PPPP P
Sbjct: 5 PPGNPP----PPPPPPGFEPPSQPPPPPP 29
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 586 PPGXRPPPPXPXXXXPP 636
PPG PPPP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPP 21
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 562 PPXPPPXXPPGXRPPPPXPXXXXPP 636
P PPP PP PP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXPXPXPP 953
P PP P PP P P P PP
Sbjct: 11 PPPPPPGFEPPSQP--PPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = -3
Query: 632 GXXXXGXGGGGRXPGGXXGGGXGGXGXXXGGGGGG 528
G G GG G PGG GGG GG G GG GGG
Sbjct: 231 GGFEGGPGGFGGGPGG-FGGGLGGFGGGPGGFGGG 264
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/37 (51%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 635 GGXXXXGXGGGGRXPG-GXXGGGXGGXGXXXGGGGGG 528
GG G G GG G G GGG GG G GG GGG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/46 (45%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = -3
Query: 635 GGXXXXGXGGGGRXPG-GXXG--GGXGGXGXXXGGGGGGGXXXXXF 507
GG G G GG PG G G GG GG G GG GG G F
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGF 233
Score = 35.1 bits (77), Expect = 0.015
Identities = 18/35 (51%), Positives = 18/35 (51%)
Frame = -3
Query: 632 GXXXXGXGGGGRXPGGXXGGGXGGXGXXXGGGGGG 528
G G GG G PGG GG GG G GG GGG
Sbjct: 217 GHHHGGHGGFGGGPGGFE-GGPGGFGGGPGGFGGG 250
Score = 32.7 bits (71), Expect = 0.080
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -1
Query: 970 GGGGGXGGXGXGXXGGGGGXXXGXGGXG 887
G GGG GG G G G GGG GG G
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
Score = 30.3 bits (65), Expect = 0.43
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -3
Query: 617 GXGGGGRXPGGXXG--GGXGGXGXXXGGGGGG 528
G GG G GG G GG GG GG GGG
Sbjct: 212 GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 30.3 bits (65), Expect = 0.43
Identities = 17/31 (54%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = -1
Query: 970 GGGGGXGG--XGXGXXGGG-GGXXXGXGGXG 887
G GGG GG G G GGG GG G GG G
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Score = 29.1 bits (62), Expect = 0.98
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 965 GGGXGGXGXGXXGGGGGXXG 906
GGG GG G G G GGG G
Sbjct: 248 GGGLGGFGGGPGGFGGGPGG 267
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 970 GGGGGXGGXGXGXXGGGGGXXXGXG 896
GGG G G G G GGG G G G
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 617 GXGGGGRXPGGXXGGGXGGXGXXXGGGGGGG 525
G GGG G GGG GG GG GG G
Sbjct: 184 GHNGGG---FGGFGGGSGGPPPGPGGFGGFG 211
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.015
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXP 633
PPPPPPP P P P G PPP P P
Sbjct: 337 PPPPPPPRSNAAGSIPLP--PQGRSAPPPPPPRSAP 370
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXP 618
PP PP PP PP P G PP P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 31.1 bits (67), Expect = 0.24
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXPXPXPPXPPPP 968
P PP PPPPP P PPP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 31.1 bits (67), Expect = 0.24
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXPP 636
PP P PP PP PP PP P P PP
Sbjct: 415 PPVPTPP---SLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 30.3 bits (65), Expect = 0.43
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPP--PXXPPGXRPPPPXP 618
P PP P P P P P PP PPP P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.5 bits (63), Expect = 0.75
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +1
Query: 526 PPPPPPPXXXPX--PPXPPPXXPPGXRPPPPXP 618
PPPPPPP PP PPPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.5 bits (63), Expect = 0.75
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXXPPGXRPPPP 612
P PP PP PP P R PPP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 29.1 bits (62), Expect = 0.98
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +1
Query: 526 PPPPPPPXXXP-XPPXPP--PXXPPGXRPPPPXP 618
P PP P P PP PP P PP P P P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXP 633
PPPPPP PPP PP P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXP-XPXPPXPPPP 968
PP P P PP P P PP P P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXPXPXPPXPPPP 968
P P PP PP P P P P P
Sbjct: 458 PLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 907 PXXPPPPPXXPXPXPPXPPPP 969
P PP PP P P P P P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 13/41 (31%)
Frame = +1
Query: 526 PPPPPP-----------PXXXPXPPXPPPXXPP--GXRPPP 609
PPPPPP P PP PPP P G +PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXPXPXPPXP 959
PP P P PPP P P P P
Sbjct: 467 PPLPPAAPAPPPA-PAPAPAAP 487
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 8/45 (17%)
Frame = +1
Query: 526 PPPPPP------PXXXPXPPXPP--PXXPPGXRPPPPXPXXXXPP 636
PP PP P P PP P P P G PP P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXP 618
PP PPP P PP PP P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Frame = +1
Query: 904 PPXXPPP--PPXXPXPXPPXPPP 966
PP PP PP P PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP 437
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXP--XPXPPXPPPP 968
P PP PP P P P PP P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.3 bits (75), Expect = 0.026
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 635 GGXXXXGXGGGGRXPGGXXG--GGXGGXGXXXGGGGG 531
GG G G GG GG G GG GG G GG GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 33.1 bits (72), Expect = 0.060
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 617 GXGGGGRXPGGXXGGGXGGXGXXXGGGGGGG 525
G GG R G GG GG G GG GGG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGG 39
Score = 33.1 bits (72), Expect = 0.060
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 632 GXXXXGXGGGGRXPGGXXGGGXGGXGXXXGGGGG 531
G G GG G GG GGG GG GG GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -3
Query: 632 GXXXXGXGGGGRXPGGXXGGGXGGXGXXXGGGGG 531
G G GG R G GG GG G GG GG
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 31.1 bits (67), Expect = 0.24
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -3
Query: 635 GGXXXXGXGG--GGRXPGGXXGGGXGGXGXXXGGGGGG 528
GG G GG GGR G GG GG GG GG
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 29.1 bits (62), Expect = 0.98
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -3
Query: 632 GXXXXGXGGGGRXPGGXXGGGXGGXGXXXGGGGGG 528
G GG G GG G G GG G GGG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFG-GGRGGARGGGRGG 42
Score = 29.1 bits (62), Expect = 0.98
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 970 GGGGGXGGXGXGXXGGGGGXXXGXGG 893
G GGG GG G GG G G GG
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = -3
Query: 632 GXXXXGXGG--GGRXP-GGXXGGG-XGGXGXXXGGGGGGG 525
G G GG GGR GG GG GG G GG GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -1
Query: 970 GGGGGXGGXGXGX--XGGGGGXXXGXGGXG 887
GG GG GG G G GG GG G GG G
Sbjct: 23 GGRGGFGG-GRGGARGGGRGGARGGRGGRG 51
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 617 GXGGGGRXPGGXXGG--GXGGXGXXXGGGGGGG 525
G GG GG GG G GG GGG GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 33.1 bits (72), Expect = 0.060
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -3
Query: 635 GGXXXXGXGGGGRXPGGXXGGGXGGXGXXXGGGGGGG 525
GG G GG GG GG GG G GG GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -3
Query: 635 GGXXXXGXGGGGRXPGGXXGGGXGGXGXXXGGGGGGG 525
GG G GGG R GG GG GG GG GG
Sbjct: 155 GGNSRGGFGGGSR--GGFGGGSRGGSRGGFRGGSRGG 189
Score = 30.7 bits (66), Expect = 0.32
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -3
Query: 617 GXGGGGRXPGGXXGGGXGGXGXXXGGGGGGG 525
G GG G GG GG GG G GG GGG
Sbjct: 136 GRGGRGGFRGGR-GGSRGGFGGNSRGGFGGG 165
Score = 29.1 bits (62), Expect = 0.98
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -1
Query: 970 GGGGGXGGXGXGXXGG-GGGXXXGXGG 893
G GG GG G GG GGG G GG
Sbjct: 146 GRGGSRGGFGGNSRGGFGGGSRGGFGG 172
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = -3
Query: 968 GGGGXGGXGXGXXGGG-GGXXGG 903
GGG GG G G GG GG GG
Sbjct: 163 GGGSRGGFGGGSRGGSRGGFRGG 185
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 967 GGGGXGGXGXGXXGGGGGXXXGXGGXG 887
GGG GG G G GG G G G
Sbjct: 163 GGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 632 GXXXXGXGGGGRXPGGXXGGGXGGXGXXXGGGGGGGXXXXXF 507
G G GG GG GG GG GGG G F
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGF 182
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.1 bits (67), Expect = 0.24
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -3
Query: 635 GGXXXXGXGG-GGRXPGGXXGGGXGGXGXXXGGGGGG 528
GG G GG GGR G GG GG G GG G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSG 482
Score = 30.3 bits (65), Expect = 0.43
Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 611 GGGGRXPGGXXG-GGXGGXGXXXGGGGGGG 525
GGG R GG G GG GG G G GGG G
Sbjct: 446 GGGSR--GGRGGFGGRGGFGGRGGFGGGRG 473
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.43
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXPP 636
PP P PP P PP PP P PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 29.9 bits (64), Expect = 0.56
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +1
Query: 526 PPPP--PPPXXXPXPPXPPPXXP-PGXRPPPPXP 618
PP P PPP PP P P P PPP P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 29.5 bits (63), Expect = 0.75
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXP 633
PP P P PP PP PPP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 29.1 bits (62), Expect = 0.98
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 915 PPPPPXXPXPXPPXPPPP 968
PPPPP P P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 29.1 bits (62), Expect = 0.98
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 916 PPPPPXXPXPXPPXPPPP 969
PPPPP P P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +1
Query: 526 PPPP---PPPXXXPXPPXPPPXXPPGXRPPPPXPXXXXPP 636
PP P PPP P PP P PP P PP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPPGXR 600
PPPPPP P P P G R
Sbjct: 5 PPPPPPAPAPAAAAPAPPLMTGDR 28
Score = 27.5 bits (58), Expect = 3.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPP 966
PP PP P P P P PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPP 159
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXPXPXPPXPP--PP 968
P P PP P P PP PP PP
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXPXPXPPXPPP 965
P PP P PP P P P PPP
Sbjct: 128 PAPPTPQSELRPPTSAP-PRPSIPPP 152
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 6/31 (19%)
Frame = +3
Query: 894 PPXPXXXPPPP---PXXPXPXPPXP---PPP 968
PP P PP P P P PP P PPP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 26.2 bits (55), Expect = 6.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPP 576
PPPPP P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 894 PPXPXXXPPPPPXXPXPXPPXPP 962
PP P PP P P P P P
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAP 180
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
PP P P P P PPPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 556 PXPPXPPPXXPPGXRPPPP 612
P PP PPP P P P
Sbjct: 3 PAPPPPPPAPAPAAAAPAP 21
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 535 PPPPXXXPXPPXPPPXXPPGXRPPPPXP 618
PPP P P P PPPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPP 194
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +1
Query: 526 PPPP--PPPXXXPXPPXPPPXXPPGXRPPPP 612
PPP PP P P PP PPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Frame = +1
Query: 907 PXXPP---PPPXXPXPXPPXPPPP 969
P PP P P P PP PPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 25.8 bits (54), Expect(2) = 0.62
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPP 606
PP P P P PPP PP PP
Sbjct: 224 PPTYTPKQADPLPAPPPP--PPPTLPP 248
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPP 612
P P P P P PP P P PP
Sbjct: 893 PAPIPAPVAEPAPPAAPAKEVVEKAPSPP 921
Score = 24.2 bits (50), Expect(2) = 3.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 897 PXPXXXPPPPPXXP 938
P P PPPPP P
Sbjct: 234 PLPAPPPPPPPTLP 247
Score = 22.2 bits (45), Expect(2) = 0.62
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 511 YXXXXPPPPPP 543
Y PPPPPP
Sbjct: 187 YNPPPPPPPPP 197
Score = 21.0 bits (42), Expect(2) = 3.7
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 921 PPPXXPXPXPPXPP 962
PPP PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.5 bits (63), Expect = 0.75
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPPGXRPPPPXP 618
PPPPPP P PP P PP P
Sbjct: 1882 PPPPPPMALP-KAGPPSAAPTSALPPAGPP 1910
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 562 PPXPPPXXPPGXRPPPPXPXXXXPP 636
PP PPP P PP P PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPP 1906
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXP 618
PPPPPP P PP P PP P
Sbjct: 1882 PPPPPP---MALPKAGPPSAAPTSALPPAGP 1909
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXX--PPGXRPPPP 612
PPPP P PPP PG PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPP 236
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXX--PPGXRPPPP 612
PPPP P PPP PG PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXX--PPGXRPPPP 612
PPPP P PPP PG PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXX--PPGXRPPPP 612
PPPP P PPP PG PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXX--PPGXRPPPP 612
PPPP P PPP PG PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXX--PPGXRPPPP 612
PPPP P PPP PG PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXX--PPGXRPPPP 612
PPPP P PPP PG PPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXX--PPGXRPPPP 612
PPPP P PPP PG PPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXX--PPGXRPPPP 612
PPPP P PPP PG PPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 888 PXPPX---PXXXPPPPPXXPXPXPPXPPPP 968
P PP P PPPP P PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 888 PXPPX---PXXXPPPPPXXPXPXPPXPPPP 968
P PP P PPPP P PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 888 PXPPX---PXXXPPPPPXXPXPXPPXPPPP 968
P PP P PPPP P PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 888 PXPPX---PXXXPPPPPXXPXPXPPXPPPP 968
P PP P PPPP P PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 888 PXPPX---PXXXPPPPPXXPXPXPPXPPPP 968
P PP P PPPP P PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 888 PXPPX---PXXXPPPPPXXPXPXPPXPPPP 968
P PP P PPPP P PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 888 PXPPX---PXXXPPPPPXXPXPXPPXPPPP 968
P PP P PPPP P PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 888 PXPPX---PXXXPPPPPXXPXPXPPXPPPP 968
P PP P PPPP P PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = +3
Query: 888 PXPPX---PXXXPPPPPXXPXPXPPXPPPP 968
P PP P PPPP P PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXPXPXPPXPPPP 968
P P PPPP P PPPP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPP 224
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPP 224
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPP 237
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPP 250
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPP 263
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPP 276
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPP 302
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPP 315
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPP 328
Score = 25.8 bits (54), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 904 PPXXPPPPPXXPXPXPPXPPPP 969
P PPPP P PPPP
Sbjct: 320 PGEHMPPPPMHHEPGEHMPPPP 341
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 965 GGGXGGXGXGXXGGGG-GXXGG 903
GGG GG G G GG G G GG
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGG 246
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 611 GGGGRXPGGXXGGGXGGXGXXXGGGGGGG 525
G G P GGG GG G GG G G
Sbjct: 214 GAAGIDPMSLMGGGLGGAGLGGLGGAGLG 242
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXPP-GXRPPPPXPXXXXPP 636
P PP P P P P PP P P P PP
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXP-PGXRPPPPXPXXXXP 633
P P P P P P P P PG P P P P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEP 134
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXPXPXPPXPPPP 968
P P P PP P P P P P P
Sbjct: 113 PVPEEPLPGEPPLPDEPVPEEPLPGEP 139
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXPPPXXP-PGXRPPPPXP 618
P P P P P P P P PG P P P
Sbjct: 115 PEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 532 PPPPPXXXPXPPXPPPXXPPGXRPPPP 612
P P P PP P P PPPP
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPP 747
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Frame = +3
Query: 888 PXP-PXPXXXPPPPPXXPXPXPPXPPPP 968
P P P PPPPP P PP P
Sbjct: 734 PAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 888 PXPPXPXXXPPPPPXXPXPXPPXPPPP 968
P P PPPPP P P P P
Sbjct: 347 PTPQVQGSRPPPPPPMPAPIYNVPNVP 373
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 526 PPPPPPPXXXPXPPXPPPXXPPGXRPPPPXP 618
PP P P PP PPG PP P
Sbjct: 506 PPIPGAPGMPNLNMSQPPMVPPGMALPPGMP 536
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 7.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 942 PXPPXPPPP 968
P PP PPPP
Sbjct: 945 PPPPPPPPP 953
Score = 23.0 bits (47), Expect(2) = 7.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 943 PXPPXPPPP 969
P PP PPPP
Sbjct: 945 PPPPPPPPP 953
Score = 21.0 bits (42), Expect(2) = 7.7
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 924 PPXXPXPXPPXPPP 965
P P PP PPP
Sbjct: 899 PTIITHPTPPPPPP 912
Score = 21.0 bits (42), Expect(2) = 7.7
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +1
Query: 925 PPXXPXPXPPXPPP 966
P P PP PPP
Sbjct: 899 PTIITHPTPPPPPP 912
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 907 PXXPPPPPXXPXPXPPXP 960
P PPP P P PP P
Sbjct: 802 PFKAPPPAPLPPPAPPLP 819
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +1
Query: 529 PPPPPPXXXPXPPXP---PPXXPPGXRPPPP 612
P PPP P P P PP +PP P
Sbjct: 49 PLPPPTRRLPRKPLPFRSTSLQPPSSQPPAP 79
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 608 GGGRXPGGXXGGGXGGXGXXXGGGGGG 528
GGG GG GG G GGG G
Sbjct: 443 GGGFPGGGFPGGSYNSQGFGMGGGFPG 469
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 918 PPPPXXPXPXPPXPPPP 968
PPPP PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 919 PPPPXXPXPXPPXPPPP 969
PPPP PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 918 PPPPXXPXPXPPXPPPP 968
PPPP P PPPP
Sbjct: 139 PPPPVRPNVMSQMPPPP 155
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 919 PPPPXXPXPXPPXPPPP 969
PPPP P PPPP
Sbjct: 139 PPPPVRPNVMSQMPPPP 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,239,173
Number of Sequences: 5004
Number of extensions: 44724
Number of successful extensions: 1228
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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