Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_I22
(940 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.004
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.044
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.10
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.10
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.72
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.72
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.9
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 5.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 6.7
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.1 bits (82), Expect = 0.004
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = -3
Query: 920 GXGGXXGGXXGVXXGXXRWXGXXXXGXGGGGXGXXGGXGGRRG 792
G GG GG G G + G GGG G GG GGR G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -3
Query: 920 GXGGXXGGXXGVXXGXXRWXGXXXXGXGGGGXGXXGGXGGRRG 792
G GG GG G G G GG G G GGR G
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 933 GGXXGGXGGXGXXXXXXXXGXEVGGGXXXGXRGGXXG 823
GG G GG G G G G G RGG G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.5 bits (73), Expect = 0.044
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = -3
Query: 920 GXGGXXGGXXGVXXGXXRWXGXXXXGXGGGGXGXXGGXGGRRG 792
G GG GG G G + G G GGG G GG GG G
Sbjct: 229 GPGGFEGGPGGFGGGPGGFGGGLG-GFGGGPGGFGGGPGGHGG 270
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.10
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +2
Query: 812 PPXXPXXPPLXPXXXPPPTSXPXXXXXXXXPXPPXPPLXPPPP 940
P PP P PPP S P P P PP PPPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAP--------PMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 0.95
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 836 PLXPXXXPPPTSXPXXXXXXXXPXPPXPPLXPPPP 940
P P PP P PP PP+ PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP 1717
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +2
Query: 824 PXXPPLXPXXXPPPTSXPXXXXXXXXPXPPXPPLXPP 934
P PP PPP++ P P PP P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 802 PPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPPXP 921
PP PPPP P P P PP PP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP--PPLP 1736
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +3
Query: 825 PXXPPXXPXPXPXPPPXPXXXXXXPXPXPPXPXXXXLP 938
P PP P P PP P P P P +P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.10
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Frame = +2
Query: 812 PPXXPXXPPLXPXXXPP-----PTSXPXXXXXXXXPXPPXPPLXPPPP 940
PP PP+ PP P P PP PP PPPP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.5 bits (63), Expect = 0.72
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 815 PXXPXXPPLXPXXXPP-PTSXPXXXXXXXXPXPPXPPLXPPP 937
P P PP P PP P+ P P P P+ PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/38 (34%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Frame = +1
Query: 811 PPXXPXPPPPXPXXXXPXHL-XXPXXTPXXPPXXPPXP 921
PP P PP P P P P P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Frame = +3
Query: 834 PPXXPXPXPX-PPPXPXXXXXXPXPXPPXP 920
PP P P PPP P P PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Frame = +1
Query: 793 PLLPPXPPXXPXPPPPXPXXXXP-XHLXXPXXTPXXPPXXPP 915
P P PP P PP P P P P P PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +1
Query: 802 PPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPP 915
P P P PPP P P P PP P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 834 PPXXPXPXPXPPPXPXXXXXXPXPXPP 914
P P P P PPP P P P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 813 PXXXPXXPPXXPXPXPXPPPXPXXXXXXPXPXPPXP 920
P P P P P PPP P P PP P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 812 PPXXPXXPPLXPXXXPPPTSXPXXXXXXXXPXPPXPP 922
P P PP PPP P P PP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.54
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 813 PXXXPXXPPXXPXPXPXPPPXPXXXXXXPXPXPPXP 920
P P P P P P P P P P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 5/47 (10%)
Frame = +2
Query: 815 PXXPXXPPLXPXXXPPPTSXPXXXXXXXXPXPPXPP-----LXPPPP 940
P P + P P P P P PP PP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = +1
Query: 796 LLPPXPPXXPXP-PPPXPXXXXPXHLXXPXXTPXXPPXXPPXP 921
++ P P P P PPP P P P P PP P
Sbjct: 739 VIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 802 PPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPPXP 921
PP PP P P P P + P PP PP P
Sbjct: 732 PPPPPPAVIVPTPAPA---PIPVPPPAPIMGGPPPPPPPP 768
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.72
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 793 PLLPPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPPXP 921
P PP PP P PP P P P P PP P P
Sbjct: 444 PAAPPLPPSAPI-APPLP-AGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 815 PXXPXXPPLXPXXXPPPTSXPXXXXXXXXPXPPXPPLXPPPP 940
P P PP P P P P P PP P PP P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMP-----AAPPLPPAAPAPPPAP 480
Score = 29.1 bits (62), Expect = 0.95
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 793 PLLPPXPPXXPXPPP-PXPXXXXP 861
P PP PP P PPP P P P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Frame = +1
Query: 793 PLLPPX-PPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPPXPXXXXSP 939
P LPP PP P PP P P P PP P P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 857 PPPTSXPXXXXXXXXPXPPXPPLXPPPP 940
PPP P P PP PPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +1
Query: 793 PLLPPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPPXP 921
P +P P P PP P P P PP P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP 457
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +1
Query: 793 PLLPPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPPXP 921
P P PP P PP P P P PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/46 (28%), Positives = 13/46 (28%)
Frame = +1
Query: 802 PPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPPXPXXXXSP 939
PP P PP P P P PP P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 813 PXXXPXXPPXXPXPXPXPPPXPXXXXXXPXPXPPXPXXXXLP 938
P P PP P P PP P P P LP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 793 PLLPPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPPXPXXXXSP 939
P LP P P PP P P P P P P P +P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAP-PLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 825 PXXPPXXPXPXPXPPPXP 878
P PP P P P P P P
Sbjct: 467 PPLPPAAPAPPPAPAPAP 484
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 939 GGGGXXGGXGGXGXXXXXXXXGXEVGGGXXXGXRGGXXG 823
G GG GG GG GGG G RGG G
Sbjct: 146 GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRG 184
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 860 PPTSXPXXXXXXXXPXPPXPPLXPP 934
PPT P P PP PP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 799 LPPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPP 915
+PP PP PP P P P P T PP P
Sbjct: 1207 VPPVPPPSTAPPVPTPSAGLP---PVPVPTAKAPPVPAP 1242
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 799 LPPXPPXXPXPPPPXPXXXXPXHLXXPXXTPXXP---PXXPPXP 921
+PP PP PP P P P + P P P PP P
Sbjct: 1188 VPPVPPPSEAPPVPKPSVGVPP-VPPPSTAPPVPTPSAGLPPVP 1230
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +3
Query: 813 PXXXPXXPPXXPXPXPXPPPXPXXXXXXPXPXP 911
P P P P P PP P P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +3
Query: 813 PXXXPXXPPXXPXPXPXPPPXPXXXXXXPXPXP 911
P P P P P PP P P P P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 811 PPXXPXPPPPXPXXXXPXHLXXPXXTPXXPPXXPPXP 921
P P PP P P H P P PP P
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 834 PPXXPXPXPXPPPXPXXXXXXPXPXPP 914
PP P P P PPP P P PP
Sbjct: 5 PPGNPPP-PPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 811 PPXXPXPPPPXPXXXXPXHLXXP 879
PP P PPPP P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 845 PXXXPPPTSXPXXXXXXXXPXPPXPP 922
P PPP P P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 812 PPXXPXXPPLXPXXXPPPTSXPXXXXXXXXPXPPXPPLXPPPP 940
PP P P + P PP + P P PP P+ P P
Sbjct: 577 PPVAPVAPEV-PSVPQPPVA-PVVPEAPSVPQPPVAPVAPEVP 617
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,031,382
Number of Sequences: 5004
Number of extensions: 31020
Number of successful extensions: 306
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 477327454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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