Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_I21
(918 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 7e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 37 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.008
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.019
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.019
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.17
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.23
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.53
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.2
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 28 1.6
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 3.7
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 3.7
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 4.9
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 27 4.9
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.5
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.5 bits (88), Expect = 7e-04
Identities = 27/77 (35%), Positives = 27/77 (35%)
Frame = -3
Query: 910 GGXGGGQGGXXGXXXGGRGGGGXXG*XXXGXXXXGXEXTEXGXGGGDVXXGGETXGGXXG 731
GG GGG GG G G GG G G G GG GG GG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG-GPGGFGG 249
Query: 730 GXXTXSXGGGXXAGXPG 680
G G G G PG
Sbjct: 250 GLGGFGGGPGGFGGGPG 266
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 913 GGGXGGGQGGXXGXXXGGRGGGGXXG*XXXGXXXXGXEXTEXGXGG 776
GGG GG +GG G G G GG G G G G GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLG--GFGGGPGGFGGGPGGHGG 270
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -2
Query: 914 GGGXGGXXGGXXG--GXXGWEGRGGXXGIXGXXXGXXGG 804
GGG GG G G G G+ G G G G G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.1 bits (82), Expect = 0.003
Identities = 24/63 (38%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -3
Query: 910 GGXGGGQGGXXGXXXGGRGGGGXXG*XXXGXXXXGXEXTEXGXGGGDVXXGGET--XGGX 737
GG GG +GG G GGRGG G G G G GG GG + GG
Sbjct: 9 GGRGGSRGGRGGFN-GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
Query: 736 XGG 728
GG
Sbjct: 68 KGG 70
Score = 35.5 bits (78), Expect = 0.011
Identities = 22/60 (36%), Positives = 23/60 (38%)
Frame = -3
Query: 907 GXGGGQGGXXGXXXGGRGGGGXXG*XXXGXXXXGXEXTEXGXGGGDVXXGGETXGGXXGG 728
G GG+GG G G GG G G G G G GG GG GG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGR--GGSSGG 63
Score = 35.1 bits (77), Expect = 0.014
Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 913 GGGXGGGQGGXXGXXXGGRGG-GGXXG 836
GGG GG +GG G GGRGG GG G
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = -2
Query: 914 GGGXGGXXGGXXGGXXGWEGRGGXXGIXGXXXGXXGG 804
GGG GG GG GG G RGG G G G GG
Sbjct: 37 GGGRGGARGG-RGGRGG--ARGGRGGSSGGRGGAKGG 70
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 913 GGGXGGGQGGXXGXXXGGRGG--GGXXG 836
GG GGG+GG G GGRGG GG G
Sbjct: 33 GGARGGGRGGARG-GRGGRGGARGGRGG 59
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 914 GGGXGGXXGGXXGGXXGW-EGRGGXXGIXGXXXGXXGG 804
GG GG GG GG G+ GRGG G G G GG
Sbjct: 12 GGSRGG-RGGFNGGRGGFGGGRGGARG--GGRGGARGG 46
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 807 PXXXXPXXXYPXXPPPPLPPXXXPXXPPXPPPXPPP 914
P P PPPP PP P PPP PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 846 PPPPLPPXXXPXXPPXPPPXPPP 914
PPPP P P P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
Score = 29.5 bits (63), Expect = 0.70
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 793 LXXXPPXXPXXXPXIPXXPPLPSHPXXPPXLPPXXPPXPP 912
L PP P P P+P P P P PP PP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Frame = +1
Query: 790 PLXXXPPXXPXXXPXIPXXPPLPSHPXXPPXLP------PXXPPXPPP 915
P P P P +P P+ P PP P P PP PPP
Sbjct: 737 PAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 808 PXXPXXXPXIPXXPPLPSHPXXPPXLPPXXPPXPP 912
P P P P PPLP+ P LPP P PP
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 34.7 bits (76), Expect = 0.019
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 847 PPLPSHPXXPPXLPPXXPPXPPP 915
PP+P+ P PP PP PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP 437
Score = 32.3 bits (70), Expect = 0.099
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 846 PPPPLPPXXXPXXPPXPPPXPPP 914
PP P PP P PP PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP 437
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 829 PXIPXXPPLPSHPXXPPXLPPXXPPXPP 912
P +P P LP P PP LPP PP P
Sbjct: 415 PPVPTPPSLP--PSAPPSLPPSAPPSLP 440
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Frame = +1
Query: 805 PPXXPXXXPX-IPXXPPLPSHPXXPPXLP---PXXPPXPP 912
PP P P P PPLP P LP P PP PP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 790 PLXXXPPXXPXXXPXIPXXPPLPSHPXXPPXLPPXXPPXP 909
PL P P +P PPLP PP P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 837 PXXPPPPLPPXXXPXXPPXPPPXPP 911
P PP LPP P PP PP P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 6/43 (13%)
Frame = +1
Query: 805 PPXXPXXXPXIPXXPP----LPSHPXXPPXLPPXXP--PXPPP 915
PP P P P PP P P P PP P P PPP
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 29.5 bits (63), Expect = 0.70
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 790 PLXXXPPXXPXXXPXIPXXPPLPSHPXXPPXLPPXXP--PXPPP 915
P+ P P P +P P PS P P PP P P PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAP-PSLPMGAPAAPPLPPSAPIAPP 458
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +3
Query: 837 PXXPPPPLPPXXXPXXP---PXPPPXPP 911
P PP LPP P P P PP PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 786 PXSVXSXPXXXXPXXXYPXXPPPPLPPXXXPXXPPXPPPXP 908
P S P P P PP P P PP PP P
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 5/42 (11%)
Frame = +1
Query: 805 PPXXPXXXPX--IPXXPPL--PSHPXXPPX-LPPXXPPXPPP 915
PP P P P PPL S PP PP PP PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Frame = +3
Query: 837 PXXPPPPLPPXXXPXXP-PXPPPXPPP 914
P P PP P P PPP PPP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 26.2 bits (55), Expect = 6.5
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Frame = +3
Query: 786 PXSVXSXPXXXXPXXXYPXXPP--PPLP---PXXXPXXP--PXPPPXPPP 914
P + S P P P PPLP P P P P PPP P P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = +3
Query: 822 PXXXYPXXPPPPL---PPXXXPXXPPXPPPXPPP 914
P P PPPP+ PP P P PP PPP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 805 PPXXPXXXPXIPXXPPLPSHP--XXPPXLPPXXPPXPP 912
PP P P P PP+P+ P PP LP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 787 RPLXXXPPXXPXXXPXIPXX--PPLPSHPXXPPXLPPXXPPXPPP 915
RP PP P P PP PS P P PP PP P P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG-PPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 786 PXSVXSXPXXXXPXXXYPXXPPPPLPPXXXPXXP 887
P SV P P PPPPLP P P
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.019
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +3
Query: 846 PPPPLPPXXXPXXPPXPPPXPPP 914
PPPP PP P P PPP PPP
Sbjct: 10 PPPPPPPGFEP--PSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 838 PXXPPLPSHPXXPPXLPPXXPPXPPP 915
P PP P P P PP PP PPP
Sbjct: 6 PGNPPPP--PPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Frame = +3
Query: 849 PPPLPPXXXP---XXPPXPPPXPPP 914
PP PP P PP PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 822 PXXXYPXXPPPPLPPXXXPXXPPXPPP 902
P P PPP P P PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQP--PPPPPP 30
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 910 GGXGGGQGGXXGXXXGGRGGGGXXG 836
GG GG +GG G GG GGG G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGG 169
Score = 29.5 bits (63), Expect = 0.70
Identities = 22/62 (35%), Positives = 24/62 (38%)
Frame = -3
Query: 913 GGGXGGGQGGXXGXXXGGRGGGGXXG*XXXGXXXXGXEXTEXGXGGGDVXXGGETXGGXX 734
G GG+GG G G RGG G G G G GGG G + GG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRG------GFGGGS---RGGSRGGFR 183
Query: 733 GG 728
GG
Sbjct: 184 GG 185
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 915 RGGAGGXXRGEXGGXXXVGGEGG 847
RGG GG RG GG G GG
Sbjct: 159 RGGFGGGSRGGFGGGSRGGSRGG 181
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 913 GGGXGGGQGGXXGXXXGGRGGG 848
GG GG +GG G GG GG
Sbjct: 168 GGFGGGSRGGSRGGFRGGSRGG 189
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 787 GXGGGDVXXGGETXGGXXGGXXTXSXGGGXXAGXPG 680
G GG GG + GG GG GGG G G
Sbjct: 146 GRGGSRGGFGGNSRGG-FGGGSRGGFGGGSRGGSRG 180
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 913 GGGXGGGQGGXXGXXXGGRGGGGXXG 836
GG GG GG G GG GG G
Sbjct: 164 GGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 790 PLXXXPPXXPXXXPXIP-XXPPLPSHPXXPPXLPPXXPPXPPP 915
P PP P P IP PP+PS PP P P PP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPS--SLPPPAQPAAPVKSPP 185
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 817 PXXXPXIPXXPPLPSHPXXPPXLPPXXPPXPPP 915
P P P P PS P P +PP P PPP
Sbjct: 173 PPAQPAAPVKSP-PSAPSLPSAVPPMPPKVPPP 204
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +1
Query: 787 RPLXXXPPXXPXXXPXIPXXPPLPSH-PXXPPXLPPXXPPXPP 912
RP PP P PP+PS P P LPP P P
Sbjct: 138 RPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 7/48 (14%)
Frame = +1
Query: 790 PLXXXPPXXPXXXPXIPXXPPLPSHPXXP-------PXLPPXXPPXPP 912
P P P P IP P P+ P P P LP PP PP
Sbjct: 152 PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 790 PLXXXPPXXPXXXPXIPXXPPLPSHPXXPPXLPPXXPPXP 909
P PP P P P PS P P +PP PP P
Sbjct: 168 PSSLPPPAQPAAPVKSP--PSAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = +3
Query: 822 PXXXYPXXP--PPPLPPXXXPXXPPXPPPXPPP 914
P P P PP P PP PP PPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 829 PXIPXXPPLPSHPXXPPXLPPXXPPXPPP 915
P PP P PP P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPP 152
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 786 PXSVXSXPXXXXPXXXYPXXPPPPLPPXXXPXXPPXPPPXP 908
P S P P P P P P PP PP P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.9 bits (64), Expect = 0.53
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 913 GGGXGGGQGGXXG-XXXGGRGG-GGXXG 836
GGG GG+GG G GGRGG GG G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRG 473
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +3
Query: 786 PXSVXSXPXXXXPXXXYPXXPPP-PLPPXXXP--XXPPXPPPXPPP 914
P P P P PPP PP P PP PPP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 790 PLXXXPPXXPXXXPXIPXXPPLPSHPXXPPXLPPXXPPXPPP 915
PL PP P P P LPS P +P PP P P
Sbjct: 1007 PLARVPPV-PKLSSKAPPVP-LPSADAPPIPVPSTAPPVPIP 1046
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 913 GGGXGGGQGGXXGXXXGGRGGGGXXG 836
GG GG GG G GG GG G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +1
Query: 790 PLXXXPPXXPXXX--PXIPXXPPLPSHPXXPPXLPPXXPPXPP 912
P PP P P +P P +P P P PP PP
Sbjct: 662 PSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQLNEPVVPPLPP 704
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 838 PXXPPLPSHPXXPPXLPPXXPP 903
P PP+P P P PP PP
Sbjct: 166 PAMPPIPFLPFNPAAQPPFPPP 187
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +3
Query: 846 PPPPLPPXXX-PXXPPXPPPXPPP 914
P P +PP P P PP PPP
Sbjct: 164 PNPAMPPIPFLPFNPAAQPPFPPP 187
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 837 PXXPPPPLPPXXXPXXPPXPPP 902
P PP P P PP PPP
Sbjct: 166 PAMPPIPFLPFNPAAQPPFPPP 187
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 913 GGGXGG-GQGGXXGXXXGGRGG 851
GGG GG G GG G GG GG
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGG 246
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 913 GGGXGGGQGGXXGXXXGGRGGGGXXG*XXXGXXXXGXEXTEXGXGGG 773
GGG GGG GG G GG G G G G G
Sbjct: 136 GGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAG 182
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 835 IPXXPPLPSHPXXPPXLP--PXXPPXPPP 915
+P PPLP+ P LP P P P P
Sbjct: 103 LPREPPLPNEPVPEEPLPGEPPLPDEPVP 131
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Frame = +3
Query: 837 PXXPPPPLPPXXXPXXPPXPPPXP--PP 914
P PP P P P PPP P PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,190,291
Number of Sequences: 5004
Number of extensions: 31912
Number of successful extensions: 442
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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