Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_I18
(894 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 32 0.13
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.22
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.22
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.67
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.89
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.6
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.1
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 27 2.7
SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 3.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.6
SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyce... 27 4.8
SPCC645.11c |mug117||meiotically upregulated gene Mug117|Schizos... 27 4.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 7.1
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 894 GGXXXGGGEGGGXGXGXXGGGRGXG 820
GG GG GG G G GGGRG G
Sbjct: 451 GGRGGFGGRGGFGGRGGFGGGRGRG 475
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.22
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 821 PXPRPPPXXPXPXPPPSPPP 880
P P PPP P PP PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
Score = 30.7 bits (66), Expect = 0.29
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 821 PXPRPPPXXPXPXPPPSPPP 880
P P PP P PPP PPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.67
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 827 PRPPPXXPXPXPPPSPPPXXXP 892
P PPP P PP PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 821 PXPRPPPXXPXPXPPPSPPPXXXP 892
P PPP P PPS PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.22
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 821 PXPRPPPXXPXPXPPPSPPP 880
P P PPP PPP PPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPP 781
Score = 29.5 bits (63), Expect = 0.67
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 821 PXPRPPPXXPXPXPPPSPPP 880
P P PPP PPP PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPP 767
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 8/57 (14%)
Frame = +2
Query: 734 LXXPAPXPPXPXLXXXXXXXXXXXXXXXXPX---PRPPPXXP-----XPXPPPSPPP 880
L +P PP P + P P PPP P P PPP PPP
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 727 PPPVXPRXXAPXPXXXXXXXXXXXXXXXXXXXPPPAPPXXXXPXAPPLXPSXPP 888
PPP P P P PPP PP PP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGP--PPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +1
Query: 823 PPPAPPXXXXPX-APPLXPSXPPXP 894
PPP PP P AP P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 827 PRPPPXXPXPXPPPSPPPXXXP 892
P PPP P P P+P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPP 754
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.67
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +2
Query: 713 PPISSXXLXX--PAPXPPXPXLXXXXXXXXXXXXXXXXPXPRPPPXXPXPXPPPSPPPXX 886
PP+SS PAP P P P PP P P PPS PP
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP-PSAPPSLPPSA 435
Query: 887 XP 892
P
Sbjct: 436 PP 437
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +1
Query: 727 PPPVXPRXXAPX-PXXXXXXXXXXXXXXXXXXXPPPAPPXXXXPXAPPLXPSXPP 888
PPP P AP P PP APP P APP P P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP-PSAPPSLPMGAP 444
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 3/23 (13%)
Frame = +2
Query: 821 PXPRPPPXXPX---PXPPPSPPP 880
P RPP P P PPP PPP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPP 259
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.89
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 821 PXPRPPPXXPXPXPPPSPPPXXXP 892
P P P P PPP PPP P
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLPP 248
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 827 PRPPPXXPXPXPPPSPPPXXXP 892
P PP P P PPS PP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 827 PRPPPXXPXPXPPPSPPP 880
P PPP PPPS PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPP 1722
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +1
Query: 823 PPP--APPXXXXPXAPPLXPSXPPXP 894
PPP PP P P PS PP P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -2
Query: 893 GXGGXEGXRGGAXGXXXXGGAGGGXXXXXXXXXXXXXXXXXXXGXGAXXRGXTGGG 726
G GG G RGG G GG GGG G RG + GG
Sbjct: 10 GRGGSRGGRGGFNG--GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = -1
Query: 894 GGXXXGGGEGGGXGXGXXG--GGRG 826
G GGG GG G G G GGRG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRG 48
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 891 GXXXGGGEGGGXGXGXXGGGRG 826
G GG GG G G GGRG
Sbjct: 37 GGGRGGARGGRGGRGGARGGRG 58
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 879 GGGEGGGXGXGXXGGGRG 826
GGG GG G G GG RG
Sbjct: 163 GGGSRGGFGGGSRGGSRG 180
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 876 GGEGGGXGXGXXGGGRG 826
GG GGG G G GGG G
Sbjct: 81 GGPGGGPGEGFPGGGFG 97
>SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 865
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 304 YAVVQFQSIKYCNVFYKWKCENSFIFVRHSIVFIVN*CTKKYI-FYIALAS 155
Y+ V + I + + + C N + + S++F VN T+KYI Y++ +S
Sbjct: 576 YSQVLNKLIYFFTIAICYACINPLVLLFASVLFCVNYLTQKYILMYVSNSS 626
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/61 (22%), Positives = 21/61 (34%)
Frame = +2
Query: 710 EPPISSXXLXXPAPXPPXPXLXXXXXXXXXXXXXXXXPXPRPPPXXPXPXPPPSPPPXXX 889
+P +++ + P+ PP P P P+P P PP PP
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPK-PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 890 P 892
P
Sbjct: 1203 P 1203
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/60 (25%), Positives = 18/60 (30%)
Frame = +2
Query: 713 PPISSXXLXXPAPXPPXPXLXXXXXXXXXXXXXXXXPXPRPPPXXPXPXPPPSPPPXXXP 892
PP+ P+ PP P P P P P P P + PP P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPA--PSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
>SPCC584.13 |||amino acid permease, unknown 14|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 544
Score = 26.6 bits (56), Expect = 4.8
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 212 NRMPNKYETVFTFPFIKYIAIFN-RLKLYH-CVAAGVVMPSCGVLEMLQVFSENTFFTAA 385
+R+ Y FPF KY+AI + R K + CV VV+ G+L L +F+ A
Sbjct: 354 SRVTYSYARDGVFPFSKYLAIVDKRTKTPNVCVWMNVVV---GILCCLLIFAGEAAINAI 410
Query: 386 YLGITVGSLLSIASLPFXNXIGFLYISDD 472
+ +VG++ + + + ++ +D
Sbjct: 411 F---SVGAIAAFVAFTTPIFLRVFFVKED 436
>SPCC645.11c |mug117||meiotically upregulated gene
Mug117|Schizosaccharomyces pombe|chr 3|||Manual
Length = 186
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +2
Query: 122 YLRMLRNLSKYTCK---SNIKNVFFCTLVNNENNRMPNKY 232
Y R L N+ Y +N K F C ++ EN PN Y
Sbjct: 51 YRRSLFNMLGYDNSVHPNNCKGSFLCPMLRGENRACPNAY 90
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 7.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 854 PXPPPSPPP 880
P PPP PPP
Sbjct: 945 PPPPPPPPP 953
Score = 21.0 bits (42), Expect(2) = 7.1
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2
Query: 836 PPXXPXPXPPPSPP 877
P P PPP PP
Sbjct: 899 PTIITHPTPPPPPP 912
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,785,157
Number of Sequences: 5004
Number of extensions: 53689
Number of successful extensions: 352
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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