Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_I17
         (1104 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB028999-1|BAA83028.1|  804|Homo sapiens KIAA1076 protein protein.     32   4.3  
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr...    31   7.5  
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.     31   7.5  
AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.  ...    31   9.9  

>AB028999-1|BAA83028.1|  804|Homo sapiens KIAA1076 protein protein.
          Length = 804

 Score = 31.9 bits (69), Expect = 4.3
 Identities = 16/46 (34%), Positives = 16/46 (34%)
 Frame = +3

Query: 555 PXFXASVXSXPPRXXPXPXQPXXPXXXRXXXPPXXPPXPSXXSXXH 692
           P     V   PP   P P QP  P   R   PP  PP P      H
Sbjct: 141 PEHDLEVEPEPPMMLPLPLQPPLP-PPRPPRPPSPPPEPETTDASH 185


>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
           protein.
          Length = 1009

 Score = 31.1 bits (67), Expect = 7.5
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +2

Query: 584 PPXXXPXPXPAXPSPXXPXXXXPXPXPXP 670
           PP   P P P  P P  P    P P P P
Sbjct: 466 PPMPPPPPPPPPPPPPPPPPPPPPPLPGP 494


>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
          Length = 1112

 Score = 31.1 bits (67), Expect = 7.5
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +2

Query: 584 PPXXXPXPXPAXPSPXXPXXXXPXPXPXP 670
           PP   P P P  P P  P    P P P P
Sbjct: 569 PPMPPPPPPPPPPPPPPPPPPPPPPLPGP 597


>AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.
           ).).
          Length = 232

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 584 PPXXXPXPXPAXPSPXXPXXXXPXPXP 664
           PP   P P P  PSP  P    P P P
Sbjct: 157 PPPSPPPPPPPPPSPLPPPPPPPPPTP 183


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,924,874
Number of Sequences: 237096
Number of extensions: 445519
Number of successful extensions: 5683
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4483
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15258197976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)