Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_I17
         (1104 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin pr...    32   1.2  
BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p pro...    32   1.2  
AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA...    32   1.2  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    31   2.1  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    31   2.1  

>X05285-1|CAA28903.1|  147|Drosophila melanogaster fibrillarin
           protein.
          Length = 147

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -2

Query: 677 RGGXGGXGGGXXXXXXXGXXXLGGGXXXXXGXGAXGXXEXG 555
           RGG GG GGG       G    GGG     G G  G  + G
Sbjct: 16  RGGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRG 56


>BT001738-1|AAN71493.1|  331|Drosophila melanogaster RE72617p
           protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -2

Query: 677 RGGXGGXGGGXXXXXXXGXXXLGGGXXXXXGXGAXGXXEXG 555
           RGG GG GGG       G    GGG     G G  G  + G
Sbjct: 9   RGGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRG 49


>AE013599-3536|AAF46950.1|  344|Drosophila melanogaster CG9888-PA
           protein.
          Length = 344

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -2

Query: 677 RGGXGGXGGGXXXXXXXGXXXLGGGXXXXXGXGAXGXXEXG 555
           RGG GG GGG       G    GGG     G G  G  + G
Sbjct: 9   RGGGGGGGGGGGGFRGRGGGGGGGGGGFGGGRGRGGGGDRG 49


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 584 PPXXXPXPXPAXPSPXXPXXXXPXPXP 664
           PP   P P PA P+P  P    P P P
Sbjct: 241 PPTPPPGPGPAQPAPQPPRPQPPRPQP 267


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 584 PPXXXPXPXPAXPSPXXPXXXXPXPXP 664
           PP   P P PA P+P  P    P P P
Sbjct: 241 PPTPPPGPGPAQPAPQPPRPQPPRPQP 267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,206,864
Number of Sequences: 53049
Number of extensions: 131103
Number of successful extensions: 2542
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2027
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5739749274
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)