Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_I15
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   146   1e-35

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  146 bits (355), Expect = 1e-35
 Identities = 69/93 (74%), Positives = 76/93 (81%)
 Frame = +1

Query: 187 AADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVE 366
           A + PE+ LFG+WS   V VSD+SL DYI VKEK AKYLPHSAGR+  +RFRKA CPIVE
Sbjct: 17  ATEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSAGRFQVRRFRKAACPIVE 76

Query: 367 RLTNSLMMHGRNXGXKLMAVRIVKHAFEIIHLL 465
           RL NSLMMHGRN G KLM VRIVKHAFEII+LL
Sbjct: 77  RLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLL 109



 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 47/87 (54%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
 Frame = +3

Query: 459 LVTGENPLQVLVTALSXLDP----VKI-RLGSVVRVQFVVKPLMFHPWRRVNQAIWLLCX 623
           L+TGENP+QVLV A+    P     +I R G+V R    V PL     RRVNQAIWLLC 
Sbjct: 108 LLTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPL-----RRVNQAIWLLCT 162

Query: 624 GAREAAFXXIKXXAXCVAXELXXAA*G 704
           GAREAAF  +K  A C+A EL  AA G
Sbjct: 163 GAREAAFRNVKTIAECLADELINAAKG 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,179,950
Number of Sequences: 27780
Number of extensions: 303924
Number of successful extensions: 1162
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)