Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_I12
         (944 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023587-1|AAH23587.1|  523|Homo sapiens REST corepressor 2 prot...    35   0.37 
BC010608-1|AAH10608.1|  305|Homo sapiens RCOR2 protein protein.        35   0.37 
BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        32   3.5  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     32   3.5  
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    31   8.1  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                31   8.1  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     31   8.1  

>BC023587-1|AAH23587.1|  523|Homo sapiens REST corepressor 2
           protein.
          Length = 523

 Score = 35.1 bits (77), Expect = 0.37
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +1

Query: 571 PLPASPAXLHXRTPXPLTHPRXVXPXXPPSXPPXPLXLP 687
           PLP +P  L  R P PL   R + P   P+ PP PL  P
Sbjct: 456 PLPTAPTLL--RQPPPLQQGRFLQPRLAPNQPPPPLIRP 492


>BC010608-1|AAH10608.1|  305|Homo sapiens RCOR2 protein protein.
          Length = 305

 Score = 35.1 bits (77), Expect = 0.37
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +1

Query: 571 PLPASPAXLHXRTPXPLTHPRXVXPXXPPSXPPXPLXLP 687
           PLP +P  L  R P PL   R + P   P+ PP PL  P
Sbjct: 238 PLPTAPTLL--RQPPPLQQGRFLQPRLAPNQPPPPLIRP 274


>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +1

Query: 571 PLPASPAXLHXRTPXPLTHPRXVXPXXPPSXPPXPLXLPXXXP 699
           P P  P      +P PL  P    P  PP  PP P  +P   P
Sbjct: 108 PPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 150


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +1

Query: 571 PLPASPAXLHXRTPXPLTHPRXVXPXXPPSXPPXPLXLPXXXP 699
           P P  P      +P PL  P    P  PP  PP P  +P   P
Sbjct: 653 PPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPP 695


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +1

Query: 571 PLPASPAXLHXRTPXP-LTHPRXVXPXXPPSXPPXP 675
           PLP  PA  +   P P L+ P    P  PP  PP P
Sbjct: 494 PLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPPPGP 529


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +1

Query: 571 PLPASPAXLHXRTPXP-LTHPRXVXPXXPPSXPPXP 675
           PLP  PA  +   P P L+ P    P  PP  PP P
Sbjct: 365 PLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPPPGP 400


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = +1

Query: 577  PASPAXLHXRTPXPLTHPRXVXPXXPPSXPPXPLXLPXXXP 699
            PA P+      P P   P    P  P   PP PL LP   P
Sbjct: 946  PALPSEARAPPPPPPPPPHPPLPPPPLPPPPLPLRLPPLPP 986


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,183,384
Number of Sequences: 237096
Number of extensions: 986042
Number of successful extensions: 5059
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4664
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)