Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_I07
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1622 - 28309472-28309871,28310362-28310399                       29   6.7  
08_01_0420 + 3726392-3727116,3727450-3727648,3727787-3727879,372...    28   8.9  

>08_02_1622 - 28309472-28309871,28310362-28310399
          Length = 145

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -2

Query: 727 WXWXWXGGXGXXXSXXGQXVXXQGPVEIDGVEGGQPLGA 611
           W W W GG G       +     G VE   V GG+  GA
Sbjct: 41  WWWRWRGGRGAEEGRQRRARDRGGSVEATMVGGGRGGGA 79


>08_01_0420 +
           3726392-3727116,3727450-3727648,3727787-3727879,
           3728001-3728129,3728445-3728498,3728597-3728674,
           3728773-3728835,3729101-3729213,3729392-3729500
          Length = 520

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +2

Query: 596 GLAHX--SPQRLSSLNXIYLNGTLXXXLLT 679
           G AH   SP+ + S N IYL GT+   LLT
Sbjct: 190 GAAHFAVSPELIQSRNRIYLRGTVSKELLT 219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,491,342
Number of Sequences: 37544
Number of extensions: 279682
Number of successful extensions: 754
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)