Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_I06
         (901 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    25   0.94 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    25   0.94 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    25   0.94 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    25   0.94 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   3.8  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   8.8  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   8.8  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 513 SPCTRDDAPSCTVGXRRSEVPPH 581
           +PCT      CT   R+ E PPH
Sbjct: 433 NPCTHTTTNGCTAELRKKE-PPH 454


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 513 SPCTRDDAPSCTVGXRRSEVPPH 581
           +PCT      CT   R+ E PPH
Sbjct: 419 NPCTHTTTNGCTAELRKKE-PPH 440


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 513 SPCTRDDAPSCTVGXRRSEVPPH 581
           +PCT      CT   R+ E PPH
Sbjct: 453 NPCTHTTTNGCTAELRKKE-PPH 474


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 513 SPCTRDDAPSCTVGXRRSEVPPH 581
           +PCT      CT   R+ E PPH
Sbjct: 402 NPCTHTTTNGCTAELRKKE-PPH 423


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 417 ASLRYVKLDISSHFSYLGGLTCATXSFLKSLVS 319
           +SLR  K  ISSH    G + C +  F + L++
Sbjct: 46  SSLRNYKTLISSHDELPGHINCDSSKFEEDLMN 78


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/53 (24%), Positives = 15/53 (28%)
 Frame = +1

Query: 730 PPHXXDPQPXXXRAPRPXXRPXNPXLXPXXRSGXPLPPAPXXXXPXLPXTSPG 888
           P +   P+P   R  R       P          P PP P       P   PG
Sbjct: 74  PVYIPQPRPPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPG 126



 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/53 (24%), Positives = 15/53 (28%)
 Frame = +1

Query: 730 PPHXXDPQPXXXRAPRPXXRPXNPXLXPXXRSGXPLPPAPXXXXPXLPXTSPG 888
           P +   P+P   R  R       P          P PP P       P   PG
Sbjct: 130 PVYIPQPRPPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPG 182


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 309 RLTVTRSPLVALISPCT 259
           R  +T++PL  +  PCT
Sbjct: 103 RKVITKAPLECMCRPCT 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,841
Number of Sequences: 438
Number of extensions: 5607
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)