Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_I01
         (907 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0486 - 3455030-3455770                                           31   1.7  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    30   2.9  
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411...    30   2.9  
05_03_0618 - 16262826-16263097,16263111-16263183                       28   8.9  
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767...    28   8.9  

>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 585 PPTXHXLTXHXPEXVPPXXPPXPTXXTPXAHXPP 686
           PPT   +  + P   PP  PP PT  +P  + PP
Sbjct: 106 PPTPPYVPPYIPPPTPPYVPP-PTPPSPPPYVPP 138



 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 585 PPTXHXLTXHXPEXVPPXXPPXPTXXTPXAHXPP 686
           PPT   +    P   PP  PP PT  +P  + PP
Sbjct: 118 PPTPPYVPPPTPPSPPPYVPP-PTPPSPPPYVPP 150


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 595  PTTXPXTXPXPXPLXXXXXLPRXPPPHTXXPP 690
            P+  P T P P PL      P  PPP    PP
Sbjct: 1162 PSPPPATPPPPPPLSPSLPPPPPPPPLPSGPP 1193


>06_03_0867 +
           25534760-25539620,25540662-25540857,25540957-25541104,
           25541673-25541751,25542151-25542238,25542330-25542600,
           25542676-25542718,25542801-25542904,25543374-25543790
          Length = 2068

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +1

Query: 577 HVHXRXPTTXPXTXPXPXPLXXXXXLPRXPPPHTXXPPTG 696
           H H + P   P   P P PL      P  PPPH   PP G
Sbjct: 81  HHHQQLPAPTPPPPPPP-PLPQHRLEP--PPPHYGFPPRG 117


>05_03_0618 - 16262826-16263097,16263111-16263183
          Length = 114

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 164 SSWCKCGVRSQRTHGEDEGKQSQSHLGAV 78
           S  C+CG+RS+R    +E +  +  LG V
Sbjct: 24  SGHCRCGLRSRRCTAREEFRSKEEMLGIV 52


>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
            13676868-13677330,13677855-13678036,13678093-13678235,
            13678315-13678423,13679000-13679456,13680490-13682473,
            13682507-13682626,13682920-13682971
          Length = 1467

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +3

Query: 579  CXPPTXHXLTXHXPEXVPPXXPPXPTXXTPXAHXPP 686
            C     H L    P+  PP  PP P+   P    PP
Sbjct: 1106 CRTSDRHTLGPPLPDDRPPSPPPLPSSPPPVPPPPP 1141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,899,312
Number of Sequences: 37544
Number of extensions: 273638
Number of successful extensions: 1102
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)