Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_H23
(969 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.009
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.18
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.75
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.98
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 29 1.3
SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces po... 27 4.0
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 27 4.0
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 5.3
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 27 5.3
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 26 6.9
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 26 9.2
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 9.2
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.009
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -1
Query: 726 GGGXXXXXXXXGXXXXXXXGXXXGXGG-GGXXGGXGGGXGGXGG 598
GGG G G G GG GG GG GGG GG GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -1
Query: 726 GGGXXXXXXXXGXXXXXXXGXXXGXGG-GGXXGGXGGGXGGXGGVXXXAR 580
GG G G G GG GG GG GG GG GG A+
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
Score = 30.7 bits (66), Expect = 0.32
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -1
Query: 651 GGGGXXGGXGGGXGGXGGVXXXARXEREXXXGWGXGXTGG 532
G GG GG GG GG G R R G G +GG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.75
Identities = 18/69 (26%), Positives = 18/69 (26%)
Frame = +3
Query: 525 PPXXPCXLXPXXXXPPFXXXXXXXPXPXPPXPPXXLPXFXRPPXXXXXXXPXXXPPXXXX 704
PP L P PP P PP P P P P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 705 XXXXXPPXP 731
PP P
Sbjct: 190 LPSAVPPMP 198
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.1 bits (62), Expect = 0.98
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = -1
Query: 729 GGGGXXXXXXXXGXXXXXXXGXXXGXGGGGXXGGXGGG--XGGXGGVXXXAR 580
G GG G G G GGG GG GGG G GG +R
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSR 187
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -2
Query: 224 RWKSSPSITASAHRA-TSKTTWASTHRRPAPRWSTATSHAKSTPQ-SVTLS 78
R S +I + R+ TS T + R RWS+ +SH+K + Q SV++S
Sbjct: 465 RSSSQSNIEPNGVRSPTSSPTGSPIRRTSGNRWSSGSSHSKKSAQRSVSMS 515
>SPBC14F5.01 ||SPBC1861.10|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 278
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -2
Query: 203 ITASAHRATS--KTTWASTHRRPAPRWSTATSHAKSTPQSVTLSQKFCMYSTQR 48
+T++ R TS +T W + W H P + +FC T R
Sbjct: 218 VTSNIQRLTSLYQTRWKRINSEEKRNWEEWIKHKYKIPNDTNIELEFCFSVTDR 271
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 77 AIASQIEGWIWHERSRWTT*GRAAYAWRPT 166
+++ +++GW WH S G YAW P+
Sbjct: 100 SVSPEMDGWPWHHNSSSNPQG---YAWTPS 126
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 657 GXGGGGXXGGXGGGXGGXGG 598
G GG G G G G GG GG
Sbjct: 227 GLGGAGLGGLGGAGLGGFGG 246
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -2
Query: 182 ATSKTTWASTHRRPAPRWSTATSHAKSTPQSVTLSQKFCMYSTQ 51
A+ T +T+ +P PRW +++ K+ S SQ + TQ
Sbjct: 603 ASQLTIVDATYSQPPPRWESSSRDDKTNTSSTQPSQVDSLVPTQ 646
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 218 KSSPSITASAHRATSKTTWASTHRRPAPRWSTATSHAKS 102
KS + + + S T S H RP+P+ +TA S + S
Sbjct: 244 KSRRLLLEAKYPTVSPTNEPSAHSRPSPQGTTANSSSAS 282
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -2
Query: 233 LRSRWKSSPSITASA---HRATSKTTWASTHRRP 141
L S+ K++PSITA A A SK ++ S + RP
Sbjct: 331 LDSKEKNTPSITAKAGSPQSAPSKASYISPYARP 364
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 492 PVXPXXXXPXPPPXXPCXLXPXXXXPPFXXXXXXXPXPXPPXP 620
P P PPP P P PP P P PP P
Sbjct: 742 PTPAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,817,373
Number of Sequences: 5004
Number of extensions: 28273
Number of successful extensions: 151
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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