Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_H23
         (969 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   5.5  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   7.3  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 651  GGGGXXGGXGGGXGGXGG 598
            GGGG   G GG  GG GG
Sbjct: 1705 GGGGSLAGLGG-LGGLGG 1721


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 651  GGGGXXGGXGGGXGGXGG 598
            GGGG   G GG  GG GG
Sbjct: 1701 GGGGSLAGLGG-LGGLGG 1717


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 155 THRRPAPRWSTATSHAKSTP 96
           T  RPA  + TATSH  S P
Sbjct: 23  TSHRPAWWFWTATSHEASAP 42


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 143 PAPRWSTATSHAKS 102
           P+P W T T  AK+
Sbjct: 132 PSPEWDTVTPEAKN 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,197
Number of Sequences: 438
Number of extensions: 3659
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31927896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)