Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_H21
(928 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 43 5e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.033
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.043
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.100
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.23
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.53
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.98
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.1
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac... 28 2.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 2.8
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 27 5.0
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.7
SPAC1F12.06c |||endonuclease |Schizosaccharomyces pombe|chr 1|||... 26 8.7
SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyce... 26 8.7
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 43.2 bits (97), Expect = 5e-05
Identities = 39/161 (24%), Positives = 46/161 (28%), Gaps = 4/161 (2%)
Frame = +3
Query: 444 PXPXXXXXPPXPXXSTRAXD--PPLVRXXCIPXMXPXXDDFGPTPTXMX*XPCPIRXXXD 617
P P PP P S+ A PP+ P P P P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA 1101
Query: 618 PXAXXXXXSXXRXXPPXX-PPLPL-HXXAPPXPXXRSXXXXPXPSIPFPPPXXXXPXXXL 791
P + P PP+P APP P P PS+ PP +
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 792 XRXXXXXXXXXXXXXPPPPXPXPPXXPPPXXPXPXXXPPXP 914
+ PP P P PP P P PP P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPP-VPPPSEAPPVP 1201
Score = 38.3 bits (85), Expect = 0.002
Identities = 38/162 (23%), Positives = 42/162 (25%), Gaps = 1/162 (0%)
Frame = +3
Query: 444 PXPXXXXXPPXPXXSTRAXDPPLVRXXCIPXMXPXXDDFGPTPTXMX*XPCPIRXXXDPX 623
P P PP P S A P P P P P+ P P+ P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAA-PPVPVPSGAPPV 1142
Query: 624 AXXXXXSXXRXXPPXXPPLPL-HXXAPPXPXXRSXXXXPXPSIPFPPPXXXXPXXXLXRX 800
+ P PP+P APP P S P P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP------PVPKPAAGVPPVPPPSE 1196
Query: 801 XXXXXXXXXXXXPPPPXPXPPXXPPPXXPXPXXXPPXPXXPP 926
P PP P P P P P PP
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 35.5 bits (78), Expect = 0.011
Identities = 40/170 (23%), Positives = 47/170 (27%), Gaps = 11/170 (6%)
Frame = +3
Query: 438 PXPXPXXXXXPPXPXX---STRAXDPPLVRXXCIPXMXPXXDDFGPTPTXMX*XPCP-IR 605
P P PP P S+ +PP P P P P P +
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTS--PAAPLARVPPVPKLS 1018
Query: 606 XXXDPXAXXXXXSXXRXXPPXXPPLPLHXXAPPXPXXRSXXXXPXPSIPFPPPXXXXPXX 785
P + P PP+P+ PP P S PS P P P
Sbjct: 1019 SKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSG----APSAPPPVPAPSSEIP 1074
Query: 786 XLXRXXXXXXXXXXXXXPPPPXP---XPPXXPP----PXXPXPXXXPPXP 914
+ PP P P PP P P P P PP P
Sbjct: 1075 SIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.033
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +2
Query: 671 PPPPPPXXXXPRXXXX-VXXRXXXPFNPXPPXXPXXTXPXXXSPXPPPLXPP 823
PPPPPP P + P PP P P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Frame = +3
Query: 840 PPPXPX---PPXXPPPXXPXPXXXPPXPXXPP 926
PPP P PP PPP PP P PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.70
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 837 PPPPXPXPPXXPPPXXPXPXXXPPXPXXPP 926
PP P P PPP PP P PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 663 PXXPPLPLHXXAPPXPXXRSXXXXPXPSIPFPPP 764
P PP P+ PP P P P PPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Frame = +3
Query: 837 PPPPXPXPPXXPPPXXPXPXXXP----PXPXXPP 926
PPPP P P P P P P P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 623 GXXPXPFXXPXXTXXXPPPPPP 688
G P P P PPPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Frame = +3
Query: 837 PPP----PXPXPPXXPPPXXPXPXXXPPXPXXPP 926
PPP P P P P P PP P PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.043
Identities = 23/91 (25%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Frame = +3
Query: 660 PPXXPPLPLHXXAPPXPXXRSXXXXPXPSIPFPPPXXXXPXXXLXRXXXXXXXXXXXXXP 839
PP PP AP P + P +P PP L P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 840 P--PPXPXPPXXPPPXXPXPXXXPPXPXXPP 926
P P P P P P P P PP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 31.5 bits (68), Expect = 0.17
Identities = 38/167 (22%), Positives = 46/167 (27%), Gaps = 13/167 (7%)
Frame = +2
Query: 464 PPPXPXXKYPGR---GSPFSEXXLHPPHDXXPR*LWTNPNXNALXTLPHSXXXRSXGXXP 634
PPP P + G+ G+ S L PP P NA ++P RS P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPP--------PRSNAAGSIPLPPQGRSAPPPP 364
Query: 635 XPFXXPXXTXXXP----------PPPPPXXXXPRXXXXVXXRXXXPFNPXPPXXPXXTXP 784
P P P PP PP R + PP + P
Sbjct: 365 PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP 424
Query: 785 XXXSPXPPPLXPPXXXXXXXXXXXXXXXSPPXXXRPXXXPPXXXPPP 925
P PP PP +P P P PP
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 30.7 bits (66), Expect = 0.30
Identities = 30/114 (26%), Positives = 34/114 (29%), Gaps = 5/114 (4%)
Frame = +3
Query: 438 PXPXPXXXXXPPXPXXSTRAXDPPLVRXXCIPXMX----PXXDDFGPTPTXMX*XPCPIR 605
P P PP P S+RA P IP P + T T P +
Sbjct: 366 PRSAPSTGRQPP-PLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP 424
Query: 606 XXXDPXAXXXXXSXXRXXPPXXPPLPLHXX-APPXPXXRSXXXXPXPSIPFPPP 764
P P PPLP APP P P+ P PPP
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 26.2 bits (55), Expect = 6.6
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = +2
Query: 638 PFXXPXXTXXXPPPPPPXXXXPRXXXXVXXRXXXPFNPXPPXXPXXTXPXXXSPXPPPLX 817
P P + PPP PP P P +P P P P S PPL
Sbjct: 242 PERVPSLSAPAPPPIPP----PSNGTV----SSPPNSPPRPIAPVSMNPAINSTSKPPLP 293
Query: 818 PP 823
PP
Sbjct: 294 PP 295
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 837 PPPPXPXPPXXPPPXXPXPXXXPPXPXXPP 926
PP P P PP P P P PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 755 PPXXPXXTXPXXXSPXPPPLXPP 823
P P P +P PPP+ PP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPP 259
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +2
Query: 671 PPPPPPXXXXPRXXXXVXXRXXXPFNPXPPXXPXXTXPXXXSPXPP 808
PPPPPP R + P PP P + P PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLP-PPPPPPRSNAAGSIPLPP 355
Score = 25.8 bits (54), Expect = 8.7
Identities = 25/91 (27%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Frame = +3
Query: 660 PPXXPPLPLHXXAPPXPXXRSXXXXPXPSIPFPPPXXXXPXXXLXRXXXXXXXXXXXXXP 839
PP PP + PP S P P PPP P P
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPP----PPP----PRSNAAGSIPLPPQGRSAPPP 363
Query: 840 PPPXPXPP--XXPPPXXPXPXXXPPXPXXPP 926
PPP P PPP P P PP
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNP-PAPPP 393
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/74 (24%), Positives = 20/74 (27%)
Frame = +3
Query: 672 PPLPLHXXAPPXPXXRSXXXXPXPSIPFPPPXXXXPXXXLXRXXXXXXXXXXXXXPPPPX 851
PP+P PP P PS+P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAP-PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 852 PXPPXXPPPXXPXP 893
P PP P P P
Sbjct: 474 PAPPPAPAPAPAAP 487
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.100
Identities = 26/86 (30%), Positives = 26/86 (30%), Gaps = 4/86 (4%)
Frame = +3
Query: 681 PLHXXAPPXPXXR---SXXXXPXPSIPFPPPXXXXPXXXLXRXXXXXXXXXXXXXPPPPX 851
P APP P P PSIP P P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPS-------KAPPIPSSLPPPAQ 176
Query: 852 PXPPXXPPPXXPX-PXXXPPXPXXPP 926
P P PP P P PP P P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVP 202
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 840 PPPXPXPPXXPPPXXPXPXXXPPXP 914
PPP P PP PP P P PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPP---PPPP 30
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 858 PPXXPPPXXPXPXXXPPXPXXPP 926
PP PPP P P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 843 PPXPXPPXXPPPXXPXPXXXPPXPXXPP 926
PP PP PPP P PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP--PP 30
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 840 PPPXPXPPXXPPPXXPXPXXXPPXP 914
PP P PP PP P PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 740 PFNPXPPXXPXXTXPXXXSPXPPP 811
P NP PP P P P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +3
Query: 840 PPPXPXPPXXPPPXX-PXPXXXPPXPXXPP 926
PP P PPP P P PP P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 29.9 bits (64), Expect = 0.53
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 837 PPPPXPXPPXXPPPXXPXPXXXPPXPXXPP 926
P PP P PPP P PP PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 837 PPPPXPXPPXXPPPXXPXPXXXPPXPXXP 923
PPP P P PP P P P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 840 PPPXPXPPXXPPPXXPXPXXXPPXPXXPP 926
PPP PP P P P P PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 743 FNPXPPXXPXXTXPXXXSPXPPPLXPP 823
F P P + P +P PPP PP
Sbjct: 171 FQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 24.2 bits (50), Expect(2) = 0.98
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 846 PXPXPPXXPPPXXP 887
P P PP PPP P
Sbjct: 234 PLPAPPPPPPPTLP 247
Score = 23.0 bits (47), Expect(2) = 0.98
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 837 PPPPXPXPP 863
PPPP P PP
Sbjct: 189 PPPPPPPPP 197
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 925 GGXXGXGGXXXGXGXXGGGXXGGXGXGGGG 836
G G GG G G GG GG G G GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGG-RGGFGGGRGG 34
>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
Vps23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 487
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 139 VHAFVKRDAPKEDNSINTLAESAKKTIEELREKVESALAPETVKKNFGT 285
V A +K+D +E S L TIE+L+ K E+ P K F +
Sbjct: 128 VQALIKQDFEREHTSPPELPTKLVNTIEKLKVKEENEAPPVIPAKPFSS 176
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 2.8
Identities = 43/211 (20%), Positives = 57/211 (27%), Gaps = 8/211 (3%)
Frame = +3
Query: 315 KSEARGSTESLRSNFL---VSKYITP-----NISNVIMFSTLLNKSFL*PXPXPXXXXXP 470
+ E R S +LR+ F VS+ P + + F++ SF P P
Sbjct: 409 QEEPRESVAALRARFAKANVSENNDPPTFPKTAAKISSFNSKAGTSFAKPRPFTNNPNPI 468
Query: 471 PXPXXSTRAXDPPLVRXXCIPXMXPXXDDFGPTPTXMX*XPCPIRXXXDPXAXXXXXSXX 650
P T L +P + P D + P A +
Sbjct: 469 SAPEKPTSGESLSLNPPPAMPKVFPERDISSASQKAAQPSVITPSVPQPPAAPVVPEAPS 528
Query: 651 RXXPPXXPPLPLHXXAPPXPXXRSXXXXPXPSIPFPPPXXXXPXXXLXRXXXXXXXXXXX 830
PP P P AP P + PS+P P P
Sbjct: 529 VHQPPAAPVAPEVPSAPQRPA--APVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEV 586
Query: 831 XXPPPPXPXPPXXPPPXXPXPXXXPPXPXXP 923
P P P P P P P P P
Sbjct: 587 PSVPQPPVAPVVPEAPSVPQPPVAPVAPEVP 617
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = -3
Query: 257 GAKADSTFSLNSSIVFFALSASVFMLLSSLGASRLTNACTLARQIANKIISSLFILD 87
G A + F ++ SIV+ A+ ++V + + A ++ NK+ S L++LD
Sbjct: 410 GYMAITKFEVSQSIVYSAIVSAVAEFIRQILAEDQLLLNNFFEELKNKLESDLYLLD 466
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 169 KEDNSINTLAESAKKTIEELREKVESAL 252
KE NSI+ L+ S +KTIE R + S +
Sbjct: 371 KEKNSISELSPSLQKTIEWARVNLASTI 398
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 837 PPPPXPXPPXXPPPXXPXPXXXPPXP 914
PPPP P PP P P P
Sbjct: 1884 PPPPMALPKAGPPSAAPTSALPPAGP 1909
>SPAC1F12.06c |||endonuclease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 252
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/75 (21%), Positives = 36/75 (48%)
Frame = -2
Query: 423 YSITSRTLLHSIYLGLCT*ILKNYFSGFRCFRGLQIFIKFVEAVYHRAKVFLNSLRGQGG 244
Y + R +++ YL + + ++Y GF FR ++ ++ + + H+ ++ + + G G
Sbjct: 60 YDLEQRMIIYKDYLCIEK-LEEDYVPGFLSFREIKWYLPLLNHIPHQFRIDIILVDGNGV 118
Query: 243 FNFFPQFLNCFLRTL 199
+ L C L L
Sbjct: 119 LHPVGFGLACHLGVL 133
>SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 292
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 KLWHDGRQLQRIL*KSEARGSTESL-RSNFLVSKYITPN 386
K W DGR+ RIL ++E R S ++ RSN +Y N
Sbjct: 216 KKWSDGRR-DRILKQAEERRSNRAVGRSNLSGREYFESN 253
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,945,202
Number of Sequences: 5004
Number of extensions: 59487
Number of successful extensions: 431
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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