BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_H19
(835 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U95740-1|AAC31662.1| 1199|Homo sapiens Unknown gene product prot... 32 2.2
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 25 5.1
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 25 5.1
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 25 5.1
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 25 5.1
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 25 5.1
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 31 6.8
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 30 9.0
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr... 30 9.0
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 30 9.0
AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens ... 30 9.0
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 30 9.0
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 30 9.0
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 30 9.0
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 30 9.0
>U95740-1|AAC31662.1| 1199|Homo sapiens Unknown gene product
protein.
Length = 1199
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 605 PPP---PXPXXXPPPPFFFFXXXXXXKXFFF 688
PPP P P PPPPFFFF F F
Sbjct: 871 PPPFLSPLPSFLPPPPFFFFVFFVIFIFFIF 901
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 25.0 bits (52), Expect(2) = 5.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 605 PPPPXPXXXPPP 640
PPPP P PPP
Sbjct: 363 PPPPTPRGPPPP 374
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 10/33 (30%), Positives = 11/33 (33%)
Frame = +2
Query: 734 PPXXPXXXXKKXXXPPPXXXXXXPPXXXXXPXP 832
PP P + PPP PP P P
Sbjct: 380 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 412
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 25.0 bits (52), Expect(2) = 5.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 605 PPPPXPXXXPPP 640
PPPP P PPP
Sbjct: 351 PPPPTPRGPPPP 362
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 10/33 (30%), Positives = 11/33 (33%)
Frame = +2
Query: 734 PPXXPXXXXKKXXXPPPXXXXXXPPXXXXXPXP 832
PP P + PPP PP P P
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 25.0 bits (52), Expect(2) = 5.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 605 PPPPXPXXXPPP 640
PPPP P PPP
Sbjct: 351 PPPPTPRGPPPP 362
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 10/33 (30%), Positives = 11/33 (33%)
Frame = +2
Query: 734 PPXXPXXXXKKXXXPPPXXXXXXPPXXXXXPXP 832
PP P + PPP PP P P
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 25.0 bits (52), Expect(2) = 5.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 605 PPPPXPXXXPPP 640
PPPP P PPP
Sbjct: 351 PPPPTPRGPPPP 362
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 10/33 (30%), Positives = 11/33 (33%)
Frame = +2
Query: 734 PPXXPXXXXKKXXXPPPXXXXXXPPXXXXXPXP 832
PP P + PPP PP P P
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 25.0 bits (52), Expect(2) = 5.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 605 PPPPXPXXXPPP 640
PPPP P PPP
Sbjct: 351 PPPPTPRGPPPP 362
Score = 24.6 bits (51), Expect(2) = 5.1
Identities = 10/33 (30%), Positives = 11/33 (33%)
Frame = +2
Query: 734 PPXXPXXXXKKXXXPPPXXXXXXPPXXXXXPXP 832
PP P + PPP PP P P
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP 400
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 30.7 bits (66), Expect = 6.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 566 FFXXGPXXXXKXXPPPPXPXXXPPPP 643
FF G PPPP P PPPP
Sbjct: 6 FFGQGRPGPPPPQPPPPAPFGCPPPP 31
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 605 PPPPXPXXXPPPPF 646
PPPP P PPPPF
Sbjct: 394 PPPPPPPGPPPPPF 407
>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
protein.
Length = 1009
Score = 30.3 bits (65), Expect = 9.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 578 GPXXXXKXXPPPPXPXXXPPPP 643
GP PPPP P PPPP
Sbjct: 462 GPVTPPMPPPPPPPPPPPPPPP 483
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 605 PPPPXPXXXPPPPF 646
PPPP P PPPPF
Sbjct: 394 PPPPPPPGPPPPPF 407
>AK075231-1|BAC11488.1| 169|Homo sapiens protein ( Homo sapiens
cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
Length = 169
Score = 30.3 bits (65), Expect = 9.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 605 PPPPXPXXXPPPPF 646
PPPP P PPPPF
Sbjct: 65 PPPPPPPGPPPPPF 78
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 30.3 bits (65), Expect = 9.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 605 PPPPXPXXXPPPPF 646
PPPP P PPPPF
Sbjct: 521 PPPPPPPGPPPPPF 534
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 30.3 bits (65), Expect = 9.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 605 PPPPXPXXXPPPPF 646
PPPP P PPPPF
Sbjct: 392 PPPPPPPGPPPPPF 405
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 30.3 bits (65), Expect = 9.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 578 GPXXXXKXXPPPPXPXXXPPPP 643
GP PPPP P PPPP
Sbjct: 565 GPVTPPMPPPPPPPPPPPPPPP 586
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 605 PPPPXPXXXPPPPF 646
PPPP P PPPPF
Sbjct: 394 PPPPPPPGPPPPPF 407
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,062,998
Number of Sequences: 237096
Number of extensions: 1868336
Number of successful extensions: 16644
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14709
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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