Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_H19
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 25 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 25 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 25 2.8
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.1
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 3.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.1
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 29 4.1
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.1
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 5.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 5.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 9.5
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 9.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 9.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 9.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 23 9.8
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 25.0 bits (52), Expect(2) = 2.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 608 PPPXPXXXPPPP 643
PPP P PPPP
Sbjct: 293 PPPPPTGSPPPP 304
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 10/33 (30%), Positives = 10/33 (30%)
Frame = +2
Query: 734 PPXXPXXXXKKXXXPPPXXXXXXPPXXXXXPXP 832
PP P PPP PP P P
Sbjct: 320 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 25.0 bits (52), Expect(2) = 2.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 608 PPPXPXXXPPPP 643
PPP P PPPP
Sbjct: 278 PPPPPTGSPPPP 289
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 10/33 (30%), Positives = 10/33 (30%)
Frame = +2
Query: 734 PPXXPXXXXKKXXXPPPXXXXXXPPXXXXXPXP 832
PP P PPP PP P P
Sbjct: 305 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 25.0 bits (52), Expect(2) = 2.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 608 PPPXPXXXPPPP 643
PPP P PPPP
Sbjct: 272 PPPPPTGSPPPP 283
Score = 23.0 bits (47), Expect(2) = 2.8
Identities = 10/33 (30%), Positives = 10/33 (30%)
Frame = +2
Query: 734 PPXXPXXXXKKXXXPPPXXXXXXPPXXXXXPXP 832
PP P PPP PP P P
Sbjct: 299 PPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 651 KKKGGGGXXXGFGGGG 604
K +GGGG GFGGGG
Sbjct: 72 KPRGGGGDRGGFGGGG 87
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 651 KKKGGGGXXXGFGGGG 604
K +GGGG GFGGGG
Sbjct: 72 KPRGGGGDRGGFGGGG 87
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 651 KKKGGGGXXXGFGGGG 604
K +GGGG GFGGGG
Sbjct: 72 KPRGGGGDRGGFGGGG 87
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 578 GPXXXXKXXPPPPXPXXXPPPP 643
G K PPPP P PPPP
Sbjct: 12 GDNRFRKQPPPPPSPRRAPPPP 33
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 569 FXXGPXXXXKXXPPPPXPXXXPPPPFFF 652
F P PPPP P PPPP F
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMF 90
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 596 KXXPPPPXPXXXPPPP 643
K PPPP P PPPP
Sbjct: 148 KLPPPPPIPPPGPPPP 163
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 596 KXXPPPPXPXXXPPPP 643
K PPPP P PPPP
Sbjct: 183 KPPPPPPIPPPGPPPP 198
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 596 KXXPPPPXPXXXPPPP 643
K PPPP P PPPP
Sbjct: 183 KPPPPPPIPPPGPPPP 198
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 642 GGGGXXXGFGGGGXFFXXXXG 580
GGGG GFGGGG F G
Sbjct: 481 GGGGGGGGFGGGGGGFGGGGG 501
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 581 PXXXXKXXPPPPXPXXXPPPP 643
P + PPPP P PPPP
Sbjct: 125 PAPYQQQPPPPPPPPHYPPPP 145
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 605 PPPPXPXXXPPPPFF 649
PPPP P PPPP +
Sbjct: 134 PPPPPPHYPPPPPHY 148
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 569 FXXGPXXXXKXXPPPPXPXXXPPPP 643
F P PPPP P PPPP
Sbjct: 55 FCPPPPMCPPPPPPPPPPMCPPPPP 79
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 357 PPPPPPPPPPPPP 369
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 358 PPPPPPPPPPPPP 370
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 243 PPPPSPVCMPPPP 255
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 135 PPPPSPPPPPPPP 147
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 760 PPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 760 PPPPPPGGCPPPP 772
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 73 PPPPPPMPCPPPP 85
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 75 PPPPMPCPPPPPP 87
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 2 PPPPPPPPPPPPP 14
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 3 PPPPPPPPPPPPP 15
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 4 PPPPPPPPPPPPP 16
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 5 PPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 2 PPPPPPPPPPPPP 14
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 3 PPPPPPPPPPPPP 15
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 4 PPPPPPPPPPPPP 16
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 5 PPPPPPPPPPPPP 17
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 605 PPPPXPXXXPPPP 643
PPPP P PPPP
Sbjct: 343 PPPPPPGGCPPPP 355
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 10/38 (26%), Positives = 12/38 (31%)
Frame = +2
Query: 719 PXXXXPPXXPXXXXKKXXXPPPXXXXXXPPXXXXXPXP 832
P PP P ++ PP PP P P
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIP 192
Score = 22.6 bits (46), Expect(2) = 9.8
Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
Frame = +2
Query: 605 PPPPXPXXXP--PPP 643
PPPP P P PPP
Sbjct: 138 PPPPPPPRVPRTPPP 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,161,767
Number of Sequences: 27780
Number of extensions: 234682
Number of successful extensions: 1539
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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