Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_H18
(987 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-44|AAK93864.2| 168|Caenorhabditis elegans Hypothetical... 86 4e-17
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 34 0.14
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.24
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.24
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.24
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 32 0.55
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.55
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 32 0.55
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.55
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 32 0.55
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 32 0.55
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.55
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.55
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 26 0.71
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 26 0.72
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 0.96
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 0.96
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 2.2
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 2.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.9
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 29 3.9
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 29 3.9
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.9
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 5.1
AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical ... 29 5.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.7
Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z78412-9|CAD21655.1| 454|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical pr... 28 8.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.9
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 28 8.9
>AC024817-44|AAK93864.2| 168|Caenorhabditis elegans Hypothetical
protein Y54G2A.23 protein.
Length = 168
Score = 85.8 bits (203), Expect = 4e-17
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 226 CEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEESXTGILG 405
CEVC K ++ A + K P I ++ C+ ++NKEN+FC+Y+G L ES T I+
Sbjct: 22 CEVCKKVLDDVMAKVPAGDKSKPDAIGKVIREHCETTRNKENKFCFYIGALPESATSIMN 81
Query: 406 ELSKPLSWSMPADKIC-EKL 462
E++KPLSWSMP +K+C EKL
Sbjct: 82 EVTKPLSWSMPTEKVCLEKL 101
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 34.3 bits (75), Expect = 0.14
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 4/64 (6%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPP----XXXNXTXXPXLPXXLLTXXTPT 821
P P P + PPP P L G P+P PP P P +L P
Sbjct: 533 PAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
Query: 822 XPPP 833
PPP
Sbjct: 593 PPPP 596
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +3
Query: 660 PXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLPXXLLTXXTPTXP 827
P S PPPP P PG C P P PP P P + P P
Sbjct: 752 PPISGGPPPPPPP------PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLPXXLLTXXTPTXPPP 833
P P P PPPP P PG P PP P +P L P P
Sbjct: 761 PPPPPGGCPPPPPP-----PPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
Query: 834 XHXTP 848
P
Sbjct: 816 MRKFP 820
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +3
Query: 660 PXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLPXXLLTXXTPTXP 827
P S PPPP P PG C P P PP P P + P P
Sbjct: 752 PPISGGPPPPPPP------PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLPXXLLTXXTPTXPPP 833
P P P PPPP P PG P PP P +P L P P
Sbjct: 761 PPPPPGGCPPPPPP-----PPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGP 815
Query: 834 XHXTP 848
P
Sbjct: 816 MRKFP 820
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +3
Query: 660 PXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLPXXLLTXXTPTXP 827
P S PPPP P PG C P P PP P P + P P
Sbjct: 335 PPISGGPPPPPPP------PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLPXXLLTXXTPTXPPP 833
P P P PPPP P PG P PP P +P L P P
Sbjct: 344 PPPPPGGCPPPPPP-----PPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDGP 398
Query: 834 XHXTP 848
P
Sbjct: 399 MRKFP 403
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/61 (26%), Positives = 20/61 (32%)
Frame = -2
Query: 833 WGGXRGGXXSXKXGXKXGGPXXVGXXGWXXXREGXAXAGTGKXFEXRXGGWGXXRWXGGX 654
WGG GG + G GG GW + +G G + G W G
Sbjct: 93 WGGQDGGSSAGGWGGSQGGSQGGSSGGWGGSSRSDSGSGQGGWGGQQGGNSNAGGWGGSQ 152
Query: 653 G 651
G
Sbjct: 153 G 153
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = -2
Query: 830 GGXRGGXXSXKXGXKXGGPXXV-GXXGWXXXREGXAXAGTGKXFEXRXGGWGXXRWXGGX 654
GG +GG + + G + GG G GW G G G+ GWG W GG
Sbjct: 223 GGSQGGWGN-QGGQQGGGRGGQQGPGGWGGGGRGGGWGGWGRGSRW---GWGRPSW-GGW 277
Query: 653 G 651
G
Sbjct: 278 G 278
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 0.55
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = -2
Query: 833 WGGXRGGXXSXK-XGXKXGGPXXVGXXGWXXXREGXAXAGTGKXFEXRXGGWGXXRWXGG 657
WGG RGG G GG G G G G G R GG G GG
Sbjct: 64 WGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGG 123
Query: 656 XG 651
G
Sbjct: 124 GG 125
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 32.3 bits (70), Expect = 0.55
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = -2
Query: 833 WGGXRGGXXSXKXGXKXGG----PXXVGXXGWXXXREGXAXAGTGKXFEXRXGGWGXXRW 666
+GG GG + G GG G GW + G G G + + GGWG +
Sbjct: 252 YGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGW-GQQGGGGQGGWGGPQQQQQGGWGGPQQ 310
Query: 665 XGGXG 651
GG G
Sbjct: 311 GGGGG 315
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 731 PPPXXXTTPAXQPXXXPPPSXXTSXSXNPHGXPPTP 838
PPP T+ Q PPP N HG PP P
Sbjct: 202 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPP 237
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.55
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = -2
Query: 833 WGGXRGGXXSXKXGXKXGG----PXXVGXXGWXXXREGXAXAGTGKXFEXRXGGWGXXRW 666
+GG GG + G GG G GW + G G G + + GGWG +
Sbjct: 214 YGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGW-GQQGGGGQGGWGGPQQQQQGGWGGPQQ 272
Query: 665 XGGXG 651
GG G
Sbjct: 273 GGGGG 277
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 32.3 bits (70), Expect = 0.55
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = -2
Query: 833 WGGXRGGXXSXKXGXKXGG----PXXVGXXGWXXXREGXAXAGTGKXFEXRXGGWGXXRW 666
+GG GG + G GG G GW + G G G + + GGWG +
Sbjct: 252 YGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGW-GQQGGGGQGGWGGPQQQQQGGWGGPQQ 310
Query: 665 XGGXG 651
GG G
Sbjct: 311 GGGGG 315
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 731 PPPXXXTTPAXQPXXXPPPSXXTSXSXNPHGXPPTP 838
PPP T+ Q PPP N HG PP P
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPP 223
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 731 PPPXXXTTPAXQPXXXPPPSXXTSXSXNPHGXPPTP 838
PPP T+ Q PPP N HG PP P
Sbjct: 188 PPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPP 223
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.2 bits (55), Expect(2) = 0.71
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 669 SAXPPPPXPXLKXLXRPGXCXPLPXXXPP 755
+A PPPP P L G P P PP
Sbjct: 628 AAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 24.2 bits (50), Expect(2) = 0.71
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 642 NXXAPXPXPSAXPPPPXP 695
N P P A PPPP P
Sbjct: 597 NYGTPENRPHAVPPPPPP 614
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 26.2 bits (55), Expect(2) = 0.72
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 669 SAXPPPPXPXLKXLXRPGXCXPLPXXXPP 755
+A PPPP P L G P P PP
Sbjct: 454 AAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 24.2 bits (50), Expect(2) = 0.72
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 642 NXXAPXPXPSAXPPPPXP 695
N P P A PPPP P
Sbjct: 423 NYGTPENRPHAVPPPPPP 440
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 31.5 bits (68), Expect = 0.96
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = -2
Query: 830 GGXRGGXXSXKXGXKXGG----PXXVGXXGWXXXREGXAXAGTGKXFEXRXGGWGXXRWX 663
GG GG + G GG G GW + G G G + + GGWG +
Sbjct: 216 GGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQ-QGGGGQGGWGGPQQQQQGGWGGPQQG 274
Query: 662 GGXG 651
GG G
Sbjct: 275 GGGG 278
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = -2
Query: 830 GGXRGGXXSXKXGXKXGGPXXVGXXGWXXXREGXAXAGTGKXFEXRXGGWG 678
GG +GG G G G GW ++ G G+ GGWG
Sbjct: 208 GGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWG 258
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 31.5 bits (68), Expect = 0.96
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = -2
Query: 830 GGXRGGXXSXKXGXKXGG----PXXVGXXGWXXXREGXAXAGTGKXFEXRXGGWGXXRWX 663
GG GG + G GG G GW + G G G + + GGWG +
Sbjct: 254 GGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQ-QGGGGQGGWGGPQQQQQGGWGGPQQG 312
Query: 662 GGXG 651
GG G
Sbjct: 313 GGGG 316
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = -2
Query: 830 GGXRGGXXSXKXGXKXGGPXXVGXXGWXXXREGXAXAGTGKXFEXRXGGWG 678
GG +GG G G G GW ++ G G+ GGWG
Sbjct: 246 GGGQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWG 296
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 669 SAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXN 767
S PPPP P L L +P +P PP N
Sbjct: 139 SKPPPPPPPPLPSLMQPKDTVQIPMRKPPTGRN 171
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +2
Query: 707 PXPSRLLXPPPXXXTTPAXQPXXXPPPSXXT-SXSXNPHGXPPTP 838
P S L PPP + P +P PPP T P PP P
Sbjct: 69 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP 113
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPP 755
P P A P PP P K RP P+P PP
Sbjct: 81 PLSNPPAKPTPPPPPPKPTIRP---PPIPASPPP 111
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +2
Query: 707 PXPSRLLXPPPXXXTTPAXQPXXXPPPSXXT-SXSXNPHGXPPTP 838
P S L PPP + P +P PPP T P PP P
Sbjct: 291 PTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP 335
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPP 755
P P A P PP P K RP P+P PP
Sbjct: 303 PLSNPPAKPTPPPPPPKPTIRP---PPIPASPPP 333
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/81 (24%), Positives = 22/81 (27%)
Frame = +2
Query: 596 SANGXPPXPLXSPXPQXXSXXXXXXXXXXXXQXXXQXPXPSRLLXPPPXXXTTPAXQPXX 775
S + PP SP P P P R PPP +
Sbjct: 252 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 311
Query: 776 XPPPSXXTSXSXNPHGXPPTP 838
PPP S G PP P
Sbjct: 312 LPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/81 (24%), Positives = 22/81 (27%)
Frame = +2
Query: 596 SANGXPPXPLXSPXPQXXSXXXXXXXXXXXXQXXXQXPXPSRLLXPPPXXXTTPAXQPXX 775
S + PP SP P P P R PPP +
Sbjct: 273 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 332
Query: 776 XPPPSXXTSXSXNPHGXPPTP 838
PPP S G PP P
Sbjct: 333 LPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/81 (24%), Positives = 22/81 (27%)
Frame = +2
Query: 596 SANGXPPXPLXSPXPQXXSXXXXXXXXXXXXQXXXQXPXPSRLLXPPPXXXTTPAXQPXX 775
S + PP SP P P P R PPP +
Sbjct: 258 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 317
Query: 776 XPPPSXXTSXSXNPHGXPPTP 838
PPP S G PP P
Sbjct: 318 LPPPQAGGSPPPAGTGSPPPP 338
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/76 (25%), Positives = 20/76 (26%)
Frame = +2
Query: 611 PPXPLXSPXPQXXSXXXXXXXXXXXXQXXXQXPXPSRLLXPPPXXXTTPAXQPXXXPPPS 790
PP P +P P P P PPP P P PPP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP---PPPPGRTPGPPGMPGMPPPPP 321
Query: 791 XXTSXSXNPHGXPPTP 838
G PP P
Sbjct: 322 PSRFGPPGMGGMPPPP 337
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLPXXLLTXXTPTXPPP 833
P P P P P P RP P P PP + P P T +P PPP
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTP-PSPEPRNPPR--TPPSPIPPPP 195
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/76 (25%), Positives = 20/76 (26%)
Frame = +2
Query: 611 PPXPLXSPXPQXXSXXXXXXXXXXXXQXXXQXPXPSRLLXPPPXXXTTPAXQPXXXPPPS 790
PP P +P P P P PPP P P PPP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP---PPPPGRTPGPPGMPGMPPPPP 331
Query: 791 XXTSXSXNPHGXPPTP 838
G PP P
Sbjct: 332 PSRFGPPGMGGMPPPP 347
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 651 APXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPP 755
+P P + PPP P L + P P P PP
Sbjct: 486 SPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLPXXLLTXXTPTXPPP 833
P P PS P P P L P+ PP + P T TP P P
Sbjct: 1232 PQPHPSYQAPAPPPALSVFQHSPQGAPI--TAPPPASSHHEHIAAPQARFT-PTPGAPSP 1288
Query: 834 XHXTP 848
H TP
Sbjct: 1289 WHATP 1293
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLPXXLLTXXTPTXPPP 833
P P PS P P P L P+ PP + P T TP P P
Sbjct: 1252 PQPHPSYQAPAPPPALSVFQHSPQGAPI--TAPPPASSHHEHIAAPQARFT-PTPGAPSP 1308
Query: 834 XHXTP 848
H TP
Sbjct: 1309 WHATP 1313
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 695 RXGGWGXXRWXGGXG 651
R GGWG RW GG G
Sbjct: 31 RWGGWGGNRWGGGGG 45
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 707 PXPSRLLXPPPXXXTTPAXQPXXXPPPSXXTS-XSXNPHGXPP 832
P P R PPP P P P P T P+G P
Sbjct: 126 PNPPRTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTP 168
>AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical
protein C36C5.12 protein.
Length = 219
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 232 VCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKN 342
+C++ + FAA + D++ D K EFKK C KN
Sbjct: 59 LCIERLRDFAAKV-DELDMDKKSELKEFKKTCDSLKN 94
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = +1
Query: 652 PXPPXHRXXPHPPXLXSXXXPVPAXAXPSLXXHHPXXPTXXGPPXFXPXFXLXQPPRXP 828
P PP P PP + + P P P + P P PP P L P+ P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPP---PPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +3
Query: 654 PXPXPSAXPPPPXPXLKXLXRPGXCXPLPXXXPPXXXNXTXXPXLP 791
P P P PPPP P + P C P P PP P +P
Sbjct: 48 PMPMPVCPPPPPCP-AQFCPPPPICPPPP---PPPMPCPPPPPPMP 89
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = +1
Query: 631 SXTTXXQPXPPXHRXXPHPPXLXSXXXPVPAXAXPSLXXHHPXXP--TXXGPPXFXPXFX 804
S + P PP P PP P P P++ P PP F P
Sbjct: 1329 STSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMI 1388
Query: 805 LXQPPRXPP 831
L PP PP
Sbjct: 1389 LPPPP--PP 1395
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +2
Query: 707 PXPSRLLXPPPXXXTTPAXQPXXXPPPSXXTSXSXNPHGXPPTP 838
P P PPP TP P PPP+ + + P PP P
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPP-PPPPTMSKAPTGVPLPVPPPP 1380
>Z83319-1|CAB05908.1| 322|Caenorhabditis elegans Hypothetical
protein T02D1.3 protein.
Length = 322
Score = 28.3 bits (60), Expect = 8.9
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 35 FLKILXFFDNLRGFTLAFPXFILKCLNL*HTSSNTRQK--CLNLVCF-IYYFWLRLCXWS 205
FLKI+ FF +T +L L L + TRQK C +V F I + +L C ++
Sbjct: 109 FLKIIFFFSIYFNYTAFLFPLLLSVLRLIPFNYPTRQKQLCSKVVEFSIPFIFLYPCIFT 168
Query: 206 YHFEKVIAKC 235
+ + C
Sbjct: 169 FTLNPALGLC 178
>Z78412-9|CAD21655.1| 454|Caenorhabditis elegans Hypothetical
protein M176.10 protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = -2
Query: 446 LSAGIDQLKGXDNSPKMPVXDSSRPPK**QNLFSLFFEPLQNFLNSASIFLGSFFTSSDS 267
+ A I+ + G N+ + + PPK + FS F +N + + +G FF S
Sbjct: 385 IHADIEVIVGNTNATTITSTVAPIPPK--KGFFSTLFGSFKNLFGTVTNSIGGFFIDMGS 442
Query: 266 VAANF 252
NF
Sbjct: 443 RITNF 447
>Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical
protein F44F4.4 protein.
Length = 890
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +1
Query: 238 VKTVEKFAATLSDDVKKDPKKIEAEFKKFCKGSKNKENRFCYYLGGLEESXTGILGELSK 417
+K V K + +S + K + +E F +FC+G Y GL+ +SK
Sbjct: 105 LKEVVKVSDFISTNFKLNVSGVEKNFNQFCRGFCQANEPVRQYYNGLQILGKNQTDGISK 164
Query: 418 PLSWSMP 438
+ S P
Sbjct: 165 RIDLSYP 171
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/62 (27%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +1
Query: 652 PXPPXHRXXPHP-PXLXSXXXPVPAXAXPSLXXHHPXXPTXXGPPXFXPXFXLXQPPRXP 828
P PP H P P P A P+ + P PP + P PP
Sbjct: 95 PAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPA 154
Query: 829 PH 834
PH
Sbjct: 155 PH 156
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +2
Query: 731 PPPXXXTTPAXQPXXXPPPSXXTSXSXNPHGXPPTP 838
PPP TPA P P P T+ + P P
Sbjct: 294 PPPVRDVTPARSPSPPPLPPPITTANRETQADAPPP 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,090,774
Number of Sequences: 27780
Number of extensions: 323783
Number of successful extensions: 1824
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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