Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_H16
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 176 2e-44
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 176 2e-44
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 173 2e-43
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 173 2e-43
AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical ... 30 2.7
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 29 6.3
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 176 bits (429), Expect = 2e-44
Identities = 90/108 (83%), Positives = 94/108 (87%)
Frame = +2
Query: 188 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 367
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 368 WRVISSIEQKTEGSERKQXMAKXYRVXVEKELREICYXVLGLLDXHLI 511
WRVISSIEQKTEGSE+KQ MAK YR VEKELR+IC VL LLD LI
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLI 108
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 580 LAXVGTGETRHSVVXDSPXAXPDAFEIXXAXMQPTHPIR 696
LA V +G+ R+SVV S + +AF+I MQPTHPIR
Sbjct: 131 LAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIR 169
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/33 (60%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 513 PKASXPXSXVFYLKMKGDYYXXLG--XSGHRRN 605
PKA S VFYLKMKGDYY L SG RN
Sbjct: 109 PKAGAAESKVFYLKMKGDYYRYLAEVASGDDRN 141
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 176 bits (429), Expect = 2e-44
Identities = 90/108 (83%), Positives = 94/108 (87%)
Frame = +2
Query: 188 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 367
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60
Query: 368 WRVISSIEQKTEGSERKQXMAKXYRVXVEKELREICYXVLGLLDXHLI 511
WRVISSIEQKTEGSE+KQ MAK YR VEKELR+IC VL LLD LI
Sbjct: 61 WRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLI 108
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 580 LAXVGTGETRHSVVXDSPXAXPDAFEIXXAXMQPTHPIRXXXXXXXXXXX*XIPFA-XQA 756
LA V +G+ R+SVV S + +AF+I MQPTHPIR I A +A
Sbjct: 131 LAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNAPDKA 190
Query: 757 CPLPQXAFXXA 789
C L + AF A
Sbjct: 191 CQLAKQAFDDA 201
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/33 (60%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +3
Query: 513 PKASXPXSXVFYLKMKGDYYXXLG--XSGHRRN 605
PKA S VFYLKMKGDYY L SG RN
Sbjct: 109 PKAGAAESKVFYLKMKGDYYRYLAEVASGDDRN 141
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 173 bits (420), Expect = 2e-43
Identities = 89/108 (82%), Positives = 94/108 (87%)
Frame = +2
Query: 188 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 367
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 368 WRVISSIEQKTEGSERKQXMAKXYRVXVEKELREICYXVLGLLDXHLI 511
WRVISSIEQKTEGSE+KQ +AK YRV VE+EL +IC VL LLD LI
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLI 108
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3
Query: 516 KASXPXSXVFYLKMKGDYYXXL 581
KA S VFYLKMKGDYY L
Sbjct: 110 KAGAAESKVFYLKMKGDYYRYL 131
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 580 LAXVGTGETRHSVVXDSPXAXPDAFEIXXAXMQPTHPIR 696
LA V + E R +VV S A +A +I MQPTHPIR
Sbjct: 131 LAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIR 168
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 173 bits (420), Expect = 2e-43
Identities = 89/108 (82%), Positives = 94/108 (87%)
Frame = +2
Query: 188 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 367
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSS
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60
Query: 368 WRVISSIEQKTEGSERKQXMAKXYRVXVEKELREICYXVLGLLDXHLI 511
WRVISSIEQKTEGSE+KQ +AK YRV VE+EL +IC VL LLD LI
Sbjct: 61 WRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLI 108
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 580 LAXVGTGETRHSVVXDSPXAXPDAFEIXXAXMQPTHPIR 696
LA V + E R +VV S A +A +I MQPTHPIR
Sbjct: 131 LAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIR 168
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +3
Query: 516 KASXPXSXVFYLKMKGDYYXXL 581
KA S FYLKMKGDYY L
Sbjct: 110 KAGAAESKAFYLKMKGDYYRYL 131
>AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical
protein F57B10.9 protein.
Length = 476
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Frame = +2
Query: 176 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKN--VV 349
P+ T+++ ++R +L E+ KE E ELS EE+N +S N +
Sbjct: 206 PNMTVAILLSSDIER-RLIEELHIVLREFTDFKEQAEPSTELSKEEKNRISTTISNFLIK 264
Query: 350 GARRSSW-------RVISSIEQKTE 403
G ++ +W RVIS +E E
Sbjct: 265 GGQKIAWGVETTTVRVISRVEDNGE 289
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +3
Query: 42 ICSGPAAVKASISFSARE-KLILCLNL---LVQIHFSPSDKGISELVLFHRPRCPSTRKN 209
I GP + S+ R K +L ++ +Q+H + SD+ ++ ++ P P TR+N
Sbjct: 243 IYQGPTILPDSVDTRFRSGKTVLLADVEKAFLQVHLNESDRDVTRVLWVKNPDLPPTREN 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,029,742
Number of Sequences: 27780
Number of extensions: 307981
Number of successful extensions: 705
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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