Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_H13
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0020 + 11303438-11304213,11304321-11304699                       29   3.7  
06_03_0772 + 24483314-24486781,24487148-24487240,24488366-24488458     29   3.7  
01_06_0529 - 30026101-30026277,30026363-30026438,30026509-300265...    29   3.7  
04_04_1185 - 31562061-31562519,31562962-31563026,31563384-31563420     29   4.9  
04_04_0486 - 25582072-25582283,25582366-25582420,25582503-255825...    29   4.9  
03_06_0579 + 34870958-34874578                                         29   4.9  
07_03_1203 - 24848342-24848885,24849199-24849204,24849648-248499...    29   6.5  
03_05_0124 + 21034963-21035181,21035618-21037466,21037485-210381...    28   8.6  

>08_02_0020 + 11303438-11304213,11304321-11304699
          Length = 384

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 564 RLPYWRNGRXHLIFNLYAGTWPDYA 638
           R+P  R+G  H++ NLY G W DYA
Sbjct: 256 RMPRIRHGYAHVVNNLYDG-WRDYA 279


>06_03_0772 + 24483314-24486781,24487148-24487240,24488366-24488458
          Length = 1217

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 877 GQVAEYPCTYXFXFEGXPKWLRWSGXMGGTV 785
           G++  +P      F+G P W +WSG   G++
Sbjct: 841 GEMKGFPKLEEIVFDGMPNWEKWSGIEDGSL 871


>01_06_0529 -
           30026101-30026277,30026363-30026438,30026509-30026570,
           30026882-30027031,30027213-30027338,30028096-30028305,
           30028870-30028938,30029024-30029080,30029131-30029277,
           30029358-30029542,30029623-30029698,30029796-30029918,
           30030395-30030410,30031743-30032745,30033521-30033789,
           30034297-30034415
          Length = 954

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 254 LQHLMICTLNHLDKNAILLLQH 319
           LQH++ C  NH++K A LL QH
Sbjct: 292 LQHMLGCLKNHVEKYAALLDQH 313


>04_04_1185 - 31562061-31562519,31562962-31563026,31563384-31563420
          Length = 186

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 459 LEIQMKHVYLCQLLIXWMLTPW 524
           L+  MK+   CQL I W+LT W
Sbjct: 37  LQYMMKYEVECQLYIYWVLTTW 58


>04_04_0486 -
           25582072-25582283,25582366-25582420,25582503-25582559,
           25582674-25582765,25583148-25583280,25583357-25583434,
           25583531-25583676,25583702-25583749,25583804-25584011,
           25584154-25584220,25584441-25584499
          Length = 384

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -3

Query: 471 FGSLVTYLDSLITDNTFLYEALTVPSLGY 385
           FGS+  +L + ITD+  +Y +++ PSL Y
Sbjct: 34  FGSIRYHLQASITDSENIYLSISTPSLSY 62


>03_06_0579 + 34870958-34874578
          Length = 1206

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 413 SYRKVLSVIRESRYVTRDPNEACLFVPAIDT--LDADPLVIRTCI 541
           S RKVL+ ++  +Y+ R P +  L+V  IDT   DA+ L +  CI
Sbjct: 651 SNRKVLNSVK--KYIKRCPPDVVLYVDRIDTQRQDANNLSLLQCI 693


>07_03_1203 -
           24848342-24848885,24849199-24849204,24849648-24849947,
           24852725-24853047,24853076-24853255
          Length = 450

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -2

Query: 670 ASRGSNPXESSA*SGQVPAYKLNMR*XLPFLQ*GNLDRREATSD 539
           A+RG  P  ++   G+ P  +LN    +PFL+   LD  EA  D
Sbjct: 91  AARGVYPPAAAGGDGRHPLLRLNPHECVPFLEGIYLDEEEAKLD 134


>03_05_0124 +
           21034963-21035181,21035618-21037466,21037485-21038194,
           21038426-21038470,21038557-21038745
          Length = 1003

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 862 YPCTYXFXFEGXPKWLRWSGXMGG 791
           +P      FE  PKW+ W+G   G
Sbjct: 830 FPVLEELEFENMPKWVEWTGVFDG 853


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,329,769
Number of Sequences: 37544
Number of extensions: 411741
Number of successful extensions: 899
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)