Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_H13
         (881 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    27   0.17 
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    27   0.17 
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    27   0.17 
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    27   0.17 
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    24   1.6  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    24   1.6  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    24   1.6  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    24   1.6  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    24   1.6  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   8.6  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = -2

Query: 196 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNLFHPKQVSNC*KLINGIKSLREFP 29
           R    +E+ +  K++  + +   HN  N   N  +    +NC KL   I  + + P
Sbjct: 68  RDRTERERSREPKIISSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIP 123


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = -2

Query: 196 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNLFHPKQVSNC*KLINGIKSLREFP 29
           R    +E+ +  K++  + +   HN  N   N  +    +NC KL   I  + + P
Sbjct: 68  RDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIP 123


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = -2

Query: 196 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNLFHPKQVSNC*KLINGIKSLREFP 29
           R    +E+ +  K++  + +   HN  N   N  +    +NC KL   I  + + P
Sbjct: 68  RDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIP 123


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = -2

Query: 196 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNLFHPKQVSNC*KLINGIKSLREFP 29
           R    +E+ +  K++  + +   HN  N   N  +    +NC KL   I  + + P
Sbjct: 68  RDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIP 123


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 196 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 98
           R    +E+ K  K++  + +   HN  N Y+ L
Sbjct: 68  RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 196 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 98
           R    +E+ K  K++  + +   HN  N Y+ L
Sbjct: 68  RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 196 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 98
           R    +E+ K  K++  + +   HN  N Y+ L
Sbjct: 68  RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 196 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 98
           R    +E+ K  K++  + +   HN  N Y+ L
Sbjct: 68  RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 196 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 98
           R    +E+ K  K++  + +   HN  N Y+ L
Sbjct: 301 RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 333


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 61  LVFNSLRL-VWGETNFGIYFYGCEMQAKRRYLLLFMSCAFLLY 186
           L F S+ L V G   F I F+GC    +  + +     +FLL+
Sbjct: 48  LAFPSITLIVLGSIIFVISFFGCCGAIRESHCMTITFASFLLF 90


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +2

Query: 707 FVRDLTXPLPLFHXEXPXTGRVPPGXXCP 793
           F RD   P+ +   E P     PP   CP
Sbjct: 192 FTRDKVAPILVRARETPNYTACPPTLACP 220


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 643 ILXDLTHVKLYWPXPRASE 699
           I  +LT VKL WP  R ++
Sbjct: 211 IYYNLTMVKLNWPKKRVTK 229


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,033
Number of Sequences: 438
Number of extensions: 4866
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)