Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_H07
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1432 - 26508135-26508881,26509301-26509708                       30   2.2  
08_02_1474 - 27365548-27366054                                         30   2.9  
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063...    29   5.1  
12_02_1210 + 27021592-27021616,27021835-27022256                       29   6.7  
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056...    29   6.7  
06_02_0127 + 12140843-12140966,12141170-12141567                       29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.9  

>07_03_1432 - 26508135-26508881,26509301-26509708
          Length = 384

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +1

Query: 625 PPGKLPSCAXLFPTLAALPDTCPPFSPSGXPWXLSPXPXP 744
           PP   PS    +P  ++ P +  P SPS     L P P P
Sbjct: 37  PPSLSPSTPPTYPPPSSTPPSLAPVSPSPPTTYLPPSPTP 76


>08_02_1474 - 27365548-27366054
          Length = 168

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 695 GGQVSGKAARVGNRXAHEGSXPGGNAWYL 609
           GG   G+ A VG R A  G   GG  W L
Sbjct: 104 GGAAVGRGAAVGGRGARGGCASGGGGWRL 132


>08_02_0672 -
           19904353-19904839,19905646-19905704,19906137-19906352,
           19906845-19907422,19907506-19908180,19908263-19908653,
           19909469-19909621,19909727-19909980,19911023-19911479
          Length = 1089

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 625 PPGKLPSCAXLFPTLAALPDTCPPFSPSGXPWXLSPXPXP 744
           PP   P+ A   P LA +P T  P +P+  P  L+P P P
Sbjct: 14  PPATPPTAAAGTPPLA-VPATNTPPNPATTPTPLTPNPNP 52


>12_02_1210 + 27021592-27021616,27021835-27022256
          Length = 148

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/54 (35%), Positives = 21/54 (38%)
 Frame = -2

Query: 901 GPGGXXXFXPGWNXXPXVXGXGXXGXG*XGGFXXXRPXXGGEGTXXGXGNTYXG 740
           G GG   F PG +      G G  G G  GG+       GG GT    G  Y G
Sbjct: 72  GLGGNQAFFPGSSGYGTAAGLGAGGFGPYGGY------GGGPGTYGYNGPLYFG 119


>07_03_1710 -
           28903614-28903673,28904982-28905146,28905453-28905638,
           28905784-28905927,28906281-28906460,28906559-28907215
          Length = 463

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +1

Query: 640 PSCAXLFPTLAALPDTCPPFSPSGXPWXLSPXPXP 744
           PS    +P  +A P T PP  PS  P   SP P P
Sbjct: 40  PSPTTCYPVSSAAP-TAPPPKPSPTPPPASPPPAP 73


>06_02_0127 + 12140843-12140966,12141170-12141567
          Length = 173

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = -2

Query: 844 GXGXXGXG*XGGFXXXRPXXGGEGTXXGXGNTYXGGXMXKG 722
           G G  G G  GG+       GG G   G G  Y GG    G
Sbjct: 121 GYGGYGGGGYGGYNKGYGGGGGGGYSKGFGGGYGGGGYPGG 161


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 297 NESAN---ARGEAVCVLGALPLPRSLTRCAR 380
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,440,228
Number of Sequences: 37544
Number of extensions: 458535
Number of successful extensions: 1310
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)