Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_H07
(905 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.54
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 24 2.2
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.9
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 23 3.8
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 3.8
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 23 3.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 8.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.8 bits (54), Expect = 0.54
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 473 SHVLSCVIPLILWITVLPPLSELIPLAA 390
S +LS V+ L+L +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 98 GNNRPVYISQPRPPHPRLRREAEPEAEPGN 127
Score = 23.8 bits (49), Expect = 2.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 154 GNNRPVYISQPRPPHPRLRREAEPEAEPGN 183
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 42 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 71
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 182 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 211
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 210 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 239
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.4 bits (48), Expect = 2.9
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 494 GLLLAFCSHVL-SCVIPLILWITVLPPLSELIPL 396
G ++ CS +L S + +L ++PP S IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 43 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 72
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 71 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 100
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 99 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 128
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 43 GNNRPIYIPQPRPPHPRLRREAEPKAEPGN 72
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 14 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 43
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 42 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 71
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 70 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 99
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 98 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 127
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 126 GNNRPVYIPQPRPPHPRLRREAKPEAEPGN 155
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 98 GSN*PSXKGDPRPRYXRFKS*GIPYSEXGN 9
G+N P PRP + R + P +E GN
Sbjct: 154 GNNRPVYIPQPRPPHPRLRREAEPEAEPGN 183
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 8.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 473 SHVLSCVIPLILWITVLPPLSELIPL 396
S +LS + +L ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,597
Number of Sequences: 438
Number of extensions: 5319
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -