Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G24
(1005 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 48 2e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 48 3e-06
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 40 7e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 7e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.002
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.007
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.036
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 33 0.048
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.26
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.26
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.45
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 0.78
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 29 0.78
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.8
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 28 2.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.2
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 4.2
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 9.6
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 48.0 bits (109), Expect = 2e-06
Identities = 26/70 (37%), Positives = 28/70 (40%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPX 898
PP PP S P P P PS LPPP P P P +P S + PP PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAV---PPMPPK 200
Query: 899 TSXPXXSXXP 928
P S P
Sbjct: 201 VPPPPLSQAP 210
Score = 31.9 bits (69), Expect = 0.15
Identities = 21/85 (24%), Positives = 25/85 (29%)
Frame = +2
Query: 746 STTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXX 925
S + P P P S L PP PPSP + P P + P
Sbjct: 119 SASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA 178
Query: 926 PPXLTXTHQXYTXXXXXPPPPSPPP 1000
P + P PP PP
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 31.9 bits (69), Expect = 0.15
Identities = 23/80 (28%), Positives = 27/80 (33%), Gaps = 9/80 (11%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXP------PSXLPPPPXPXXP-XXXLPPSPXPXSXLFX 877
PP PP + PP P P P+ PP P P LPP P + +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 878 XPPQP--PXTSXPXXSXXPP 931
P P P P PP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPP 203
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +2
Query: 497 LXNPQTSGXXAXXPPXHPXPXPPSXPXXPPXPPPXPXP 610
L P ++ PP P PP PP P P P
Sbjct: 137 LRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 506 PQTSGXXAXXPPXHPXPXPPSXPXXPPXPPPXP 604
P S P P PPS P P PP P
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 47.6 bits (108), Expect = 3e-06
Identities = 31/97 (31%), Positives = 35/97 (36%), Gaps = 2/97 (2%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPX 898
PP PP + + P P P S PPPP P P P S PP PP
Sbjct: 337 PPPPPPPRSNAAGSIPLP---PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Query: 899 TSXPXXSXXPPXLTXTHQXYTXXXXXPP--PPSPPPS 1003
+ P L + T PP PPS PPS
Sbjct: 394 AIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Score = 43.6 bits (98), Expect = 4e-05
Identities = 42/156 (26%), Positives = 46/156 (29%), Gaps = 1/156 (0%)
Frame = +2
Query: 539 PXHPXPXPPSXPXXPPXPPPXPXPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 718
P P PPS P P P A
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPS-PXPXSXLFXXPPQPP 895
PP PPP S PP S LPPPP P P S P P PP PP
Sbjct: 311 PPP--PPPPSRRNRGKPPIGNGSSNSSLPPPPPP--PRSNAAGSIPLPPQGR-SAPPPPP 365
Query: 896 XTSXPXXSXXPPXLTXTHQXYTXXXXXPPPPSPPPS 1003
S P PP L+ + PP+PPP+
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSN-------PPAPPPA 394
Score = 37.1 bits (82), Expect = 0.004
Identities = 28/90 (31%), Positives = 33/90 (36%)
Frame = +2
Query: 734 PPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPX 913
PP + + T PP P PPS LPP P P P P PP PP S P
Sbjct: 404 PPLGNASRTSTPP--VPTPPS-LPPSAPPSLPPSAPPSLPMGAPAA---PPLPP--SAPI 455
Query: 914 XSXXPPXLTXTHQXYTXXXXXPPPPSPPPS 1003
P + PP P+P P+
Sbjct: 456 APPLPAGMPAAPPLPPAAPAPPPAPAPAPA 485
Score = 36.3 bits (80), Expect = 0.007
Identities = 33/134 (24%), Positives = 36/134 (26%), Gaps = 9/134 (6%)
Frame = +2
Query: 554 PXPPSXPXXPPXPPPXPXPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXX 733
P PP PP PPP P PP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPAL---PPLGN 408
Query: 734 PPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXP-----XXXLPPS----PXPXSXLFXXPP 886
ST PP P P LPP P P LPPS P + + PP
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Query: 887 QPPXTSXPXXSXXP 928
PP P + P
Sbjct: 469 LPPAAPAPPPAPAP 482
Score = 35.9 bits (79), Expect = 0.009
Identities = 23/90 (25%), Positives = 28/90 (31%)
Frame = +2
Query: 734 PPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPX 913
PP + + PP P + PPP P P P + P S
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 914 XSXXPPXLTXTHQXYTXXXXXPPPPSPPPS 1003
PP + PPPP PPPS
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPP-PPPS 318
Score = 33.9 bits (74), Expect = 0.036
Identities = 28/91 (30%), Positives = 31/91 (34%), Gaps = 3/91 (3%)
Frame = +2
Query: 734 PPPXST--TXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPP-SPXPXSXLFXXPPQPPXTS 904
PPP S T PPP S PP P P P P P + PP P S
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSN-PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 905 XPXXSXXPPXLTXTHQXYTXXXXXPPPPSPP 997
P + PP L + PP PP
Sbjct: 423 LPPSA--PPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 31.1 bits (67), Expect = 0.26
Identities = 17/61 (27%), Positives = 21/61 (34%)
Frame = +2
Query: 722 PXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXT 901
P PP + + P P P P + P P P S P PP PP +
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS 296
Query: 902 S 904
S
Sbjct: 297 S 297
Score = 28.3 bits (60), Expect(2) = 0.006
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 536 PPXHPXPXPPSXPXXPPXPPPXP 604
PP P PPS P P PP P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLP 450
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +2
Query: 536 PPXHPX--PXPPSXPXXPPXPPPXPXP 610
PP P P P P PP PP P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 27.1 bits (57), Expect(2) = 0.006
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +2
Query: 722 PXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQ 889
P P P S P P P P PP P P P P + + P Q
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPL--PPAAPAPPPAPAPAPAAPVASIAELPQQ 497
Score = 27.1 bits (57), Expect = 4.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 554 PXPPSXPXXPPXPPPXP 604
P PP+ P PP P P P
Sbjct: 468 PLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 536 PPXHPXPXPPSXPXXPPXPPPXP 604
PP P P P PP PP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAP 454
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 509 QTSGXXAXXPPXHPXPXPPSXPXXPPXPPPXPXPXA 616
+TS PP P PPS P P P P A
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA 446
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 39.5 bits (88), Expect = 7e-04
Identities = 23/75 (30%), Positives = 27/75 (36%)
Frame = +2
Query: 764 PPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTX 943
PPP P +PPPP P +PP P PP PP P PP +
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPPPM-- 264
Query: 944 THQXYTXXXXXPPPP 988
+ PPPP
Sbjct: 265 ---HHEPGEHMPPPP 276
Score = 39.5 bits (88), Expect = 7e-04
Identities = 23/75 (30%), Positives = 27/75 (36%)
Frame = +2
Query: 764 PPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTX 943
PPP P +PPPP P +PP P PP PP P PP +
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPPPM-- 290
Query: 944 THQXYTXXXXXPPPP 988
+ PPPP
Sbjct: 291 ---HHEPGEHMPPPP 302
Score = 39.5 bits (88), Expect = 7e-04
Identities = 23/75 (30%), Positives = 27/75 (36%)
Frame = +2
Query: 764 PPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTX 943
PPP P +PPPP P +PP P PP PP P PP +
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPPPM-- 316
Query: 944 THQXYTXXXXXPPPP 988
+ PPPP
Sbjct: 317 ---HHEPGEHMPPPP 328
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = +2
Query: 764 PPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPP 931
PPP P +PPPP P +PP P PP PP P PP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPP 340
Score = 34.3 bits (75), Expect = 0.027
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +2
Query: 764 PPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQP 892
PPP P +PPPP P +PP P PP P
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 33.9 bits (74), Expect = 0.036
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +2
Query: 788 PPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTXTHQXYTXX 967
P +PPPP P +PP P PP PP P PP + +
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPP-PPMHHEPGEHMPPPPM-----HHEPG 256
Query: 968 XXXPPPP 988
PPPP
Sbjct: 257 EHMPPPP 263
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.5 bits (88), Expect = 7e-04
Identities = 39/175 (22%), Positives = 45/175 (25%), Gaps = 9/175 (5%)
Frame = +2
Query: 506 PQTSGXXAXXPPXHPXPXPPSXPXXPPXP------PPXPXPXAXXXXXXXXXXXXXXXXX 667
P SG P P P PP P PP P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 668 XXXXXXXXXXXXXXXXXPPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPP 847
P PP + PP P P S +PP P P +PP
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP---VPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 848 ---SPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTXTHQXYTXXXXXPPPPSPPPS 1003
+P PP PP ++ P L P P S PS
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Score = 36.7 bits (81), Expect = 0.005
Identities = 36/161 (22%), Positives = 40/161 (24%), Gaps = 7/161 (4%)
Frame = +2
Query: 539 PXHPXPXPPSXPXXPPXPPPXPXPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 718
P P P S P PPP P P +
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXP------XXPXXXLPPSPXPXSXLFXX 880
P PP PP P P PP P P P PP P P
Sbjct: 1106 KPSVAVPPVPAPSGAPP---VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG----A 1158
Query: 881 PPQP-PXTSXPXXSXXPPXLTXTHQXYTXXXXXPPPPSPPP 1000
PP P P + P + + PPP PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 36.3 bits (80), Expect = 0.007
Identities = 38/164 (23%), Positives = 42/164 (25%), Gaps = 9/164 (5%)
Frame = +2
Query: 539 PXHPXPXPPSXPXXPPXPPPXPXPXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 718
P P P P PP P P A
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP 1063
Query: 719 PPXXXPPPXSTTXTXPPPHXXPX--PPSXLPPPPXPXX-------PXXXLPPSPXPXSXL 871
PP P P S + P P P PS +PP P P P +PP P P
Sbjct: 1064 PPV--PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Query: 872 FXXPPQPPXTSXPXXSXXPPXLTXTHQXYTXXXXXPPPPSPPPS 1003
P P S PP + PP P PS
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Score = 35.1 bits (77), Expect = 0.016
Identities = 25/95 (26%), Positives = 29/95 (30%), Gaps = 1/95 (1%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXP-PQPP 895
PP S+ + PP P P P P P +PP P S P P
Sbjct: 971 PPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSAD 1030
Query: 896 XTSXPXXSXXPPXLTXTHQXYTXXXXXPPPPSPPP 1000
P S PP T P +PPP
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 31.5 bits (68), Expect = 0.19
Identities = 34/141 (24%), Positives = 38/141 (26%), Gaps = 8/141 (5%)
Frame = +2
Query: 506 PQTSGXXAXXPPXHPXPXPPSXPXXPPXP------PPXPXPXAXXXXXXXXXXXXXXXXX 667
P SG P P P+ PP P PP P P +
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 668 XXXXXXXXXXXXXXXXXPPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXP--XXPXXXL 841
PP PP T PP P P + PP P P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP--VPVPTAKAPPVPAPSSEAPSVST 1251
Query: 842 PPSPXPXSXLFXXPPQPPXTS 904
P S P S P P +S
Sbjct: 1252 PRSSVP-SPHSNASPSPTSSS 1271
Score = 30.7 bits (66), Expect = 0.34
Identities = 42/181 (23%), Positives = 48/181 (26%), Gaps = 16/181 (8%)
Frame = +2
Query: 509 QTSGXXAXXPPXHPXPXP-----PSXPXXPPXPPPXPXPXAXXXXXXXXXXXXXXXXXXX 673
+ SG PP P P P S PP P P +
Sbjct: 957 KASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK 1016
Query: 674 XXXXXXXXXXXXXXXPPXXXP---PPXS-TTXTXPPPHXXPXPPSXLPPPPXPXXPXXXL 841
PP P PP T T P P PS PP P P +
Sbjct: 1017 LSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSI 1076
Query: 842 P-PS---PXPXSXLFXXPPQPPXTSXPXXS---XXPPXLTXTHQXYTXXXXXPPPPSPPP 1000
P PS P P P+P + P PP + PP P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 1001 S 1003
S
Sbjct: 1137 S 1137
Score = 27.9 bits (59), Expect = 2.4
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXP--XXPXXXLPPSPXPXSXLFXXPPQP 892
P PP + P P P PP P P LPP P P + PP P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA---KAPPVP 1240
Query: 893 -PXTSXPXXS 919
P + P S
Sbjct: 1241 APSSEAPSVS 1250
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.027
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +2
Query: 764 PPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXS 919
PPP P+ P P P P PP P P + P PP P S
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 33.9 bits (74), Expect = 0.036
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +2
Query: 803 PPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTXTHQXYTXXXXXPP 982
PPPP P P+P P PP P P PP + PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPV------PPPAPIMGGPPPPPPPPGVAGA--------GPPP 777
Query: 983 PPSPPPS 1003
PP PPP+
Sbjct: 778 PPPPPPA 784
Score = 33.1 bits (72), Expect = 0.063
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Frame = +2
Query: 734 PPPXSTTXTXPPPHXXPXPP------SXLPPPPXPXXPXXXLPPSPXP 859
PPP + P P P PP PPPP P PP P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 32.7 bits (71), Expect(2) = 0.002
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 722 PXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXP 829
P PPP PPP P PPPP P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.34
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXP 859
P P P PPP P PPPP PP P P
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.45
Identities = 19/73 (26%), Positives = 24/73 (32%)
Frame = +2
Query: 782 PXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTXTHQXYT 961
P PP+ + P P P P PP+P PP PP + PP +
Sbjct: 734 PPPPAVIVPTPAPA-PIPVPPPAPIMGGP--PPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 962 XXXXXPPPPSPPP 1000
P P P
Sbjct: 791 RYYAPAPQAEPEP 803
Score = 28.3 bits (60), Expect(2) = 0.022
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 536 PPXHPXPXPPSXPXXPPXPPPXPXP 610
P P P PP P PPP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 536 PPXHPXPXPPSXPXXPPXPPPXPXP 610
PP P P PP P PPP P P
Sbjct: 761 PP--PPPPPPGVAGAGPPPPPPPPP 783
Score = 25.0 bits (52), Expect(2) = 0.022
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 722 PXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSP 853
P PPP PPP P PP+ P P P
Sbjct: 761 PPPPPPPPGVAGAGPPP-PPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 24.6 bits (51), Expect(2) = 0.002
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 548 PXPXPPSXPXXPPXPPPXPXP 610
P P PP+ P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP 752
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.3 bits (80), Expect = 0.007
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXS 865
P PP S PPP P PPS PP P P PP P P S
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPS---APPMPAGP-PSAPPPPLPAS 1738
Score = 33.1 bits (72), Expect = 0.063
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 722 PXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXP 859
P PPP S PPP P P+ P P P P P P P
Sbjct: 1705 PTPPPPPMSV----PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +2
Query: 737 PPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPX-PXSXLFXXPPQPPXTSXP 910
PP PP P PP PPP P PP P P S PP P +S P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPP----PPPMSVPPPPSAPPMPAGPPSA---PPPPLPASSAP 1741
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +2
Query: 506 PQTSGXXAXXPPXH--PXPXPPSXPXXPPXPPPXPXP 610
PQ S PP P P P P PP PP P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect(2) = 0.080
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXL 871
PP PPP S PP P P PPPP P + P+P S L
Sbjct: 1710 PPMSVPPPPSA----PP---MPAGPPSAPPPPLPASSAPSV-PNPGDRSAL 1752
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +2
Query: 788 PPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQ-PPXTSXPXXSXXPP 931
P S P P P P+P P PP PP + P + PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 4.2
Identities = 18/68 (26%), Positives = 23/68 (33%)
Frame = +2
Query: 791 PSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTXTHQXYTXXX 970
PS P PP P P+ S + QPP + P + P Q
Sbjct: 1472 PSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAP--ATAPSSTLPPSQSSFAHV 1529
Query: 971 XXPPPPSP 994
P PP+P
Sbjct: 1530 PSPAPPAP 1537
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 536 PPXHPXPXPPSXPXXPPXPPPXP 604
PP P PP P P PP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 22.6 bits (46), Expect(2) = 0.080
Identities = 10/26 (38%), Positives = 10/26 (38%), Gaps = 1/26 (3%)
Frame = +2
Query: 536 PPXHPX-PXPPSXPXXPPXPPPXPXP 610
PP P PP P PPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVP 1715
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.036
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 527 AXXPPXHPXPXPPSXPXXPPXPPPXPXP 610
A PP +P P PP PP PP P P
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 722 PXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXP 820
P PPP PPP PPS PPPP P
Sbjct: 5 PPGNPPP-------PPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +2
Query: 788 PPSXLPPPPXP--XXPXXXLPPSPXP 859
PP PPPP P P PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPP 793
PP PPP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 33.5 bits (73), Expect = 0.048
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +2
Query: 842 PPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTXTHQXYTXXXXXPPPPSPPPS 1003
PP+P P + PP PP S S P LT + T P SPP S
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSS-TPMNYVSQPESPPQS 783
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 31.1 bits (67), Expect = 0.26
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 764 PPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQP 892
P P P P +P P P P LP P P L PP P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEP--PLPDEPVPEEPLPGEPPLP 142
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +2
Query: 722 PXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPP 886
P P P P P P P +P P P P LP P P + P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPP--LPNEPVPETNCHKESP 156
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +2
Query: 767 PPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXP 910
P P P LP P P P PP P P +PP + P
Sbjct: 99 PEEPLPREPP-LPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect = 0.26
Identities = 20/80 (25%), Positives = 24/80 (30%)
Frame = +2
Query: 764 PPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTX 943
PPP P P + P P PP P P P P +
Sbjct: 167 PPPSFQP-PSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPP 225
Query: 944 THQXYTXXXXXPPPPSPPPS 1003
T+ PPP PPP+
Sbjct: 226 TYTPKQADPLPAPPPPPPPT 245
Score = 29.1 bits (62), Expect = 1.0
Identities = 24/94 (25%), Positives = 29/94 (30%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPX 898
PP PP + T P P PP PPP PP+ + P
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPP---PPP----------PPAVEDQAADANEPDDYYS 214
Query: 899 TSXPXXSXXPPXLTXTHQXYTXXXXXPPPPSPPP 1000
+ PP T PPPP+ PP
Sbjct: 215 SGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 28.7 bits (61), Expect = 1.4
Identities = 22/90 (24%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Frame = +2
Query: 734 PPPXSTTXTXPPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXP- 910
PP + P P P PP LPP + PP P S P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Query: 911 -XXSXXPPXLTXTHQXYTXXXXXPPPPSPP 997
+ T T PP PS P
Sbjct: 284 RPPTNASTRSTGTSSSMAHSYDSPPSPSSP 313
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.45
Identities = 24/60 (40%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 894 GGXGGXXKRXEXGXGEGGRXXXGXXGXGGGGRXEGGXGXXCGG-GXVXVVEXGGGXXXGG 718
GG GG R G GGR G G G GG GG G GG G G G GG
Sbjct: 9 GGRGG--SRGGRGGFNGGR---GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 29.5 bits (63), Expect = 0.78
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -1
Query: 894 GGXGGXXKRXEXGXGEGGRXXXGXXGXGGGGRXEGGXGXXCGGGXVXV 751
GG G + G GGR G GG G GG G GG V +
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGG-ARGGRGGSSGGRGGAKGGAKVII 75
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 609 GXGXGGGXGGXXGXEGGXGXG*XGGQ 532
G GGG GG G GG G G GG+
Sbjct: 33 GGARGGGRGGARGGRGGRG-GARGGR 57
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.5 bits (63), Expect = 0.78
Identities = 25/97 (25%), Positives = 30/97 (30%), Gaps = 5/97 (5%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPP--HXXPXPPSXLPPPPXPXXPXXXLPPSP-XPXSXLFXXPPQ 889
P PPP T PP PP P P P P P SP S + P
Sbjct: 921 PAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTP--VAPQSPVAAASRISSSPNM 978
Query: 890 PPXTSXPXXSXXPPXLTXTH--QXYTXXXXXPPPPSP 994
PP + + H + + PPP P
Sbjct: 979 PPSNPYTPIAVASSTVNPAHTYKPHGGSQIVPPPKQP 1015
Score = 27.9 bits (59), Expect = 2.4
Identities = 26/101 (25%), Positives = 35/101 (34%), Gaps = 7/101 (6%)
Frame = +2
Query: 719 PPXXXPPPXSTTXTXPPPHXX-PXPPSXL-PPPPXPXXPXXXLPPSPXPXSXLFXXPPQP 892
P P + T P H P S + PPP P LPP+ + + +P
Sbjct: 980 PSNPYTPIAVASSTVNPAHTYKPHGGSQIVPPPKQPANRVVPLPPTASQRASAY----EP 1035
Query: 893 PXTSXPXXSXXPPXLT-----XTHQXYTXXXXXPPPPSPPP 1000
P S P S P +T + + P P PPP
Sbjct: 1036 PTVSVPSPSALSPSVTPQLPPVSSRLPPVSATRPQIPQPPP 1076
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 29.5 bits (63), Expect = 0.78
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +2
Query: 788 PPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXPPXLTXTHQXYTXX 967
PPS LPPPP P S P + QP S + P +
Sbjct: 107 PPSQLPPPPQPQSHPNVTVISASPARAI---EQQPTILSSTDSNIPRPGTVKSSASPFVP 163
Query: 968 XXXPPPPSPPP 1000
P P PPP
Sbjct: 164 NQNPSAPPPPP 174
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -1
Query: 894 GGXGGXXKRXEXGXGEGGRXXXGXXGXGGG-GRXEGGXGXXCGG 766
GG GG G G G G G GGG G EGG G GG
Sbjct: 205 GGFGGFG-----GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 26.6 bits (56), Expect = 5.5
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 894 GGXGGXXKRXEXGXGEGGRXXXGXXGXGGGGRXEGGXGXXCGGG 763
GG GG E G G G G G GGG GG GGG
Sbjct: 224 GGFGGGPGGFEGGPGGFG---GGPGGFGGGLGGFGGGPGGFGGG 264
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 746 STTXTXPPPHXXPXPPSXLPPPPXP 820
++T T H P P LPPPP P
Sbjct: 50 TSTDTTHSRHRYPETPPSLPPPPSP 74
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 803 PPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXTSXPXXSXXP 928
PPPP P PPS P S L PP P S P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSAL---PPAGPPAGATAISGNP 1920
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 894 GGXGGXXKRXEXGXGEGGRXXXGXXGXGGGGRXEGGXGXXCGGG 763
GG GG R G GG G GGG R GG G GG
Sbjct: 138 GGRGGF--RGGRGGSRGGFGGNSRGGFGGGSR--GGFGGGSRGG 177
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +2
Query: 767 PPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQ-PPXTSXPXXSXXP 928
P P PP+ PP P P +P +P + PP PP + P P
Sbjct: 487 PGTSAPLPPTTFAPPGVPLPP---IPGAPGMPNLNMSQPPMVPPGMALPPGMPAP 538
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 852 GEGGRXXXGXXGXGGGGRXEGGXGXXCG 769
G GGR G G GGGR G G G
Sbjct: 455 GFGGRGGFGGRGGFGGGRGRGRGGARSG 482
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 9.6
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = +2
Query: 734 PPPXSTTXTX----PPPHXXPXPPSXLPPPPXPXXPXXXLPPSPXPXSXLFXXPPQPPXT 901
PPP ST+ T P P + PP P P + PP P T
Sbjct: 317 PPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPAST 376
Query: 902 SXPXXSXXPPXLTXT 946
S S P T T
Sbjct: 377 SSTGTSSSPLLSTST 391
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,196,268
Number of Sequences: 5004
Number of extensions: 34767
Number of successful extensions: 538
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 521265546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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