Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP19_F_G22
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0687 + 24288648-24292746,24293737-24293844,24294333-242944...    33   0.42 
01_06_0440 + 29401405-29401407,29401721-29401920,29402406-294024...    31   1.3  
06_03_0914 + 25920277-25920405,25920783-25920810,25920890-259209...    30   2.2  
06_01_0655 + 4742267-4742531,4743313-4744136                           30   2.2  
10_07_0009 - 11770674-11771000,11771079-11771378,11771487-11771807     29   5.2  
11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644           28   9.0  
11_01_0130 - 1079515-1079685,1079847-1079961,1080237-1080328,108...    28   9.0  

>01_05_0687 +
           24288648-24292746,24293737-24293844,24294333-24294442,
           24295208-24295282
          Length = 1463

 Score = 32.7 bits (71), Expect = 0.42
 Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 6/119 (5%)
 Frame = +1

Query: 172 GDHGISTANESSSSMPDPTEGHQNISLKD----LKMAMEVLNLQQKPAKTTE--EALHKA 333
           GD   S A       P P EG  + S  +       A E +  +  P   T   E+  + 
Sbjct: 185 GDEEGSHAAPEPPPPPTPLEGGPDASSAEPAAMASRAREPMGSRTAPEPPTPPLESGQEG 244

Query: 334 YQFWSTQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQWDTLNLNEPLAIERTV 510
           +Q     P P    +  ++EP ELP  P       YT PD  + D + ++   A   TV
Sbjct: 245 FQQQQPHPPPTTHPECDSSEPAELPLPPTSPAEIAYTSPDSVEVDVVAVSPEEAPGSTV 303


>01_06_0440 +
           29401405-29401407,29401721-29401920,29402406-29402490,
           29403038-29403121,29403853-29404147,29404228-29404322,
           29406118-29406858
          Length = 500

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 749 KLRSXRVXPVLIREIXXXLLNXYI-XGCVTXGIXLPXPM 862
           KLRS R+ PVLIRE+   +    I     T G+ LP P+
Sbjct: 255 KLRSKRLAPVLIREVTRRVHQENIWQAAYTAGVVLPTPI 293


>06_03_0914 +
           25920277-25920405,25920783-25920810,25920890-25920990,
           25921356-25921479,25921793-25921903,25922222-25922397,
           25922766-25922848,25922935-25923007,25923630-25923695,
           25923776-25923818,25924600-25924739,25924878-25925090,
           25925397-25925481,25925558-25925852,25926855-25927110,
           25927237-25927450,25927701-25927912,25928054-25928203
          Length = 832

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 26/89 (29%), Positives = 41/89 (46%)
 Frame = +1

Query: 184 ISTANESSSSMPDPTEGHQNISLKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWSTQPVP 363
           + T + +  S  +P   H +   K+ K+   V+   Q P   T   L K+   W  Q + 
Sbjct: 582 LPTVSSTEKSEEEPI--HSSEDSKESKVKPYVIMDHQIPNMITLSLLPKSQ--W--QSLA 635

Query: 364 KMDEKIIANEPIELPKSPEEIRAEPYTLP 450
            +D   + N+PIE PK PE+    P+ LP
Sbjct: 636 NLDIIKVRNKPIEPPKKPEK---APFFLP 661


>06_01_0655 + 4742267-4742531,4743313-4744136
          Length = 362

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = +1

Query: 100 DFSKENDEKPQXXXXXXXXXRGGDGDHGISTANESSSSMPDPTEGHQNISLKDLKMAMEV 279
           DFS+END K             G  D      N +S +M  P  G+ +I L DL+  M+ 
Sbjct: 263 DFSQENDIKTPDITSMLAPTMTGVDDSAF-LQNNASDAMVPPVMGNASIDLADLEPYMKF 321

Query: 280 L 282
           L
Sbjct: 322 L 322


>10_07_0009 - 11770674-11771000,11771079-11771378,11771487-11771807
          Length = 315

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 280 LNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEI 426
           ++ Q KP  TT     +A    +   +PK   +IIA + + LP SP +I
Sbjct: 1   MSQQGKPISTTTSGSSRARTPRTGNKIPKERFRIIAVDAVGLPTSPRKI 49


>11_01_0792 + 6679002-6679603,6738490-6738520,6738532-6739644
          Length = 581

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 349 TQPVPKMDEKIIANEPIELPKSPEEIRAEPYTLPDGFQW 465
           T P+ K   ++ ANE  E+ K  EE++ + Y  P    W
Sbjct: 17  TTPLHKRPYRMAANELAEVKKQLEELKEKGYIRPSTSPW 55


>11_01_0130 -
           1079515-1079685,1079847-1079961,1080237-1080328,
           1080435-1080520,1080957-1081056,1082180-1082210,
           1082416-1082471
          Length = 216

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = +1

Query: 235 HQNISLKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKI--IANEPI--E 402
           HQ++S+ D++ A+E  N   +  +  +EAL       +     +++ ++  +  E +  E
Sbjct: 119 HQSVSIDDIENAIEEANEHTENMRQIQEALATPIGASADFDEDELEAELEDLEEEELDHE 178

Query: 403 LPKSPEEIRAEP 438
           LP+ P+  R EP
Sbjct: 179 LPEPPQSTRMEP 190


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,859,717
Number of Sequences: 37544
Number of extensions: 404254
Number of successful extensions: 1057
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)