Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G22
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U11280-3|AAM97952.1| 403|Caenorhabditis elegans Hypothetical pr... 134 1e-31
U11280-2|AAK77637.1| 452|Caenorhabditis elegans Hypothetical pr... 134 1e-31
U11280-1|AAA19436.1| 450|Caenorhabditis elegans Hypothetical pr... 134 1e-31
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 29 6.1
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 28 8.1
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 8.1
>U11280-3|AAM97952.1| 403|Caenorhabditis elegans Hypothetical
protein T17E9.2c protein.
Length = 403
Score = 134 bits (323), Expect = 1e-31
Identities = 62/111 (55%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Frame = +2
Query: 533 VEDDDCMFRFDYQTDFLKWALQPPGWKMEWHCGVRVVKSGRLVGFISATPADLXIYNHVQ 712
VEDDD MFRFDY DFLKWALQ PG++ EWHCGVR + RL+ FI A P + +Y+
Sbjct: 87 VEDDDSMFRFDYSADFLKWALQVPGFRPEWHCGVRADSNNRLLAFIGAVPQTVRVYDKTV 146
Query: 713 TVVEINFLCVHKKLRSXRVXPVLIREIXXXL-LNXYIXGCVTXGIXLPXPM 862
+VEINFLCVHK LRS RV PVLIREI + + T GI +P P+
Sbjct: 147 NMVEINFLCVHKNLRSRRVAPVLIREITRRVNVTGIFQAAFTAGIVIPKPV 197
Score = 65.3 bits (152), Expect = 6e-11
Identities = 31/70 (44%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Frame = +1
Query: 283 NLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIA--NEPIELPKSPEEIRAEPYTLPDG 456
N+ P + +EA K++QFWSTQPVP+MDE + A N IE + +++RAEP++LP G
Sbjct: 3 NIPTAP-RDMDEARSKSFQFWSTQPVPQMDETVPADVNCAIEENIALDKVRAEPFSLPAG 61
Query: 457 FQWDTLNLNE 486
F+W ++L++
Sbjct: 62 FRWSNVDLSD 71
>U11280-2|AAK77637.1| 452|Caenorhabditis elegans Hypothetical
protein T17E9.2b protein.
Length = 452
Score = 134 bits (323), Expect = 1e-31
Identities = 62/111 (55%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Frame = +2
Query: 533 VEDDDCMFRFDYQTDFLKWALQPPGWKMEWHCGVRVVKSGRLVGFISATPADLXIYNHVQ 712
VEDDD MFRFDY DFLKWALQ PG++ EWHCGVR + RL+ FI A P + +Y+
Sbjct: 136 VEDDDSMFRFDYSADFLKWALQVPGFRPEWHCGVRADSNNRLLAFIGAVPQTVRVYDKTV 195
Query: 713 TVVEINFLCVHKKLRSXRVXPVLIREIXXXL-LNXYIXGCVTXGIXLPXPM 862
+VEINFLCVHK LRS RV PVLIREI + + T GI +P P+
Sbjct: 196 NMVEINFLCVHKNLRSRRVAPVLIREITRRVNVTGIFQAAFTAGIVIPKPV 246
Score = 69.7 bits (163), Expect = 3e-12
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Frame = +1
Query: 172 GDHGISTANESSSSMPDPTEGHQNISLKD-LKMA-MEVLNLQQKPA--KTTEEALHKAYQ 339
G HG A S S+ D Q L D L++A ++V N+ P + +EA K++Q
Sbjct: 14 GHHGDDGAGGSRPSVNDV----QAFKLVDQLRLAGVDVSNMPNIPTAPRDMDEARSKSFQ 69
Query: 340 FWSTQPVPKMDEKIIA--NEPIELPKSPEEIRAEPYTLPDGFQWDTLNLNE 486
FWSTQPVP+MDE + A N IE + +++RAEP++LP GF+W ++L++
Sbjct: 70 FWSTQPVPQMDETVPADVNCAIEENIALDKVRAEPFSLPAGFRWSNVDLSD 120
>U11280-1|AAA19436.1| 450|Caenorhabditis elegans Hypothetical
protein T17E9.2a protein.
Length = 450
Score = 134 bits (323), Expect = 1e-31
Identities = 62/111 (55%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Frame = +2
Query: 533 VEDDDCMFRFDYQTDFLKWALQPPGWKMEWHCGVRVVKSGRLVGFISATPADLXIYNHVQ 712
VEDDD MFRFDY DFLKWALQ PG++ EWHCGVR + RL+ FI A P + +Y+
Sbjct: 134 VEDDDSMFRFDYSADFLKWALQVPGFRPEWHCGVRADSNNRLLAFIGAVPQTVRVYDKTV 193
Query: 713 TVVEINFLCVHKKLRSXRVXPVLIREIXXXL-LNXYIXGCVTXGIXLPXPM 862
+VEINFLCVHK LRS RV PVLIREI + + T GI +P P+
Sbjct: 194 NMVEINFLCVHKNLRSRRVAPVLIREITRRVNVTGIFQAAFTAGIVIPKPV 244
Score = 68.5 bits (160), Expect = 6e-12
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Frame = +1
Query: 172 GDHGISTANESSSSMPDPTEGHQNISLKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWST 351
G HG A S S+ D + L + ++ + N+ P + +EA K++QFWST
Sbjct: 14 GHHGDDGAGGSRPSVNDVQALVDQLRLAGVDVS-NMPNIPTAP-RDMDEARSKSFQFWST 71
Query: 352 QPVPKMDEKIIA--NEPIELPKSPEEIRAEPYTLPDGFQWDTLNLNE 486
QPVP+MDE + A N IE + +++RAEP++LP GF+W ++L++
Sbjct: 72 QPVPQMDETVPADVNCAIEENIALDKVRAEPFSLPAGFRWSNVDLSD 118
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/112 (17%), Positives = 45/112 (40%)
Frame = +1
Query: 70 MEETKTGVSCDFSKENDEKPQXXXXXXXXXRGGDGDHGISTANESSSSMPDPTEGHQNIS 249
+++ KT DF+ +++ Q G+H +T ES + S
Sbjct: 184 IDKKKTAEKVDFTTDDNNVSQEADAKPDSTHENGGEHVSTTPEESITENTTAEVPASTAS 243
Query: 250 LKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIEL 405
KD K+++++ + +K + K + + K +E+++ E E+
Sbjct: 244 TKDTKLSVKIRSEDEKREEDKLSDDEKPNYMKKLEEIYKKEEELVERELAEM 295
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical
protein T08G11.1b protein.
Length = 3185
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 247 SLKDLKMA-MEVL-NLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPE 420
S+ DLK+A M V+ +L +++ L + + P PK DEK A + +E+P +
Sbjct: 742 SIDDLKLAKMRVIGDLPNIVIGISDDRLIGLMKLGLSIPTPKADEKTKAEKELEVPVAKI 801
Query: 421 EIRAEPYTL 447
+ RA+ T+
Sbjct: 802 KDRAKMRTI 810
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical
protein T08G11.1a protein.
Length = 3212
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 247 SLKDLKMA-MEVL-NLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPE 420
S+ DLK+A M V+ +L +++ L + + P PK DEK A + +E+P +
Sbjct: 742 SIDDLKLAKMRVIGDLPNIVIGISDDRLIGLMKLGLSIPTPKADEKTKAEKELEVPVAKI 801
Query: 421 EIRAEPYTL 447
+ RA+ T+
Sbjct: 802 KDRAKMRTI 810
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform b protein.
Length = 4034
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 250 LKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEI 426
+K +++ MEVL T EE L +A+Q +++ + ++I+ N E K EEI
Sbjct: 3838 IKTIQLRMEVLKRVSMNQSTAEELLQEAFQ--NSEQQMETFQRIVQNVHWEETKLTEEI 3894
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 250 LKDLKMAMEVLNLQQKPAKTTEEALHKAYQFWSTQPVPKMDEKIIANEPIELPKSPEEI 426
+K +++ MEVL T EE L +A+Q +++ + ++I+ N E K EEI
Sbjct: 3838 IKTIQLRMEVLKRVSMNQSTAEELLQEAFQ--NSEQQMETFQRIVQNVHWEETKLTEEI 3894
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,484,233
Number of Sequences: 27780
Number of extensions: 381300
Number of successful extensions: 1085
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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