Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G19
(893 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.17
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 30 0.51
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 29 0.67
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.89
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 1.6
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.7
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.7
SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces pombe... 27 2.7
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 3.6
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.6
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 27 4.8
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 4.8
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 4.8
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 6.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 6.3
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 26 6.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 6.3
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 6.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.3
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 26 8.3
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 26 8.3
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 26 8.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.014
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Frame = +3
Query: 723 PPPXXXXXXXPXXXXXPPPAPAXS------PXXGVXXAXPPPPPPFXP 848
PP P PPPAP P GV A PPPPPP P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.22
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 723 PPPXXXXXXXPXXXXXPPPAPAXSPXXGVXXAXPPPPPPFXPXXPXXP 866
PPP P P P P +P G PPPP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 718 PPPPPXPXXPXXPPXPXXPLP 780
PPPPP P P P P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 715 IPPPPPXPXXPXXPPXPXXP 774
IP PPP P PP P P
Sbjct: 749 IPVPPPAPIMGGPPPPPPPP 768
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 718 PPPPPXPXXPXXPPXPXXPLP 780
PPPPP PP P P P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +1
Query: 709 LXIPPPPPXPXXPXXPPX-PXXPLPXRRXP 795
+ +PPPP P P PP P PLP P
Sbjct: 1712 MSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +3
Query: 708 PSYTXPPPXXXXXXXPXXXXXPPPAPAXSPXXGVXXAXPPPPPP 839
P PP P PPP P+ P + PPPP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPP-PSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +3
Query: 771 PPPAPAXSPXXGVXXAXPPPPPPFXPXXPXXPTXXXNP 884
PP P + + PPPPP P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 29.9 bits (64), Expect = 0.51
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +1
Query: 361 LGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAXVQNTVQESQK 531
+ +A KA+++LEQ+ + E L K H + E+ + +EKL A ++ + S++
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEE 111
Query: 532 L---AKKVSSKR 558
L +SSKR
Sbjct: 112 LDHYRAIISSKR 123
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 29.5 bits (63), Expect = 0.67
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 349 SRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAXVQNTVQE-S 525
+R A +AN + E E ++ IE R+A ++ E+ + Q +E S
Sbjct: 798 ARAAEEEANRELHEQEEAQKRAIEERTRAAREAKEREQREMAEKLERQRRIQQERDEEIS 857
Query: 526 QKLAKKVSSKRA 561
+KLA+K +++RA
Sbjct: 858 RKLAEKAAARRA 869
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 806 PXXRGXRRXGR-GXXGXGGXXGXXGXGGGGGIXR 708
P G R GR G G GG G G GGG G R
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGR 476
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSSKR 558
KA + LE+ ++ E + EE+ H + T+ + + + +QE ++ K + R
Sbjct: 353 KACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDKMIDEYR 412
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 718 PPPPPXPXXPXXPPXPXXP 774
PPPPP P PP P P
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 774 PPAPAXSPXXGVXXAXPPPPPP 839
PP P P PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +3
Query: 708 PSYTXPPPXXXXXXXPXXXXXPPPAPAXSPXXGVXXAXPPPPPPFXPXXPXXP 866
PS P P PP P +P A P PP P P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
>SPBC9B6.08 |clc1||clathrin light chain|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 367 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAXVQNTVQESQKLAKKV 546
D + +E E S++ E E+ RKA D +N R+K+ + + +E +KL ++
Sbjct: 115 DQMKRIQERDESSKKLRESNIEKARKAIDDFYENFNDKRDKV---IAKSRKEQEKLLEEN 171
Query: 547 SSKRAG 564
SK G
Sbjct: 172 ESKSTG 177
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
Frame = +3
Query: 795 PXXGVXXAXPPPPPPF------XPXXPXXPTXXXNP 884
P V + PPPPPP P P PT NP
Sbjct: 347 PTPQVQGSRPPPPPPMPAPIYNVPNVPTVPTVSPNP 382
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 382 AKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 486
A E +++ +IER+A K A + E+ ATALRE
Sbjct: 157 ASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 432 LGRALDVLPRLFQSLLGLAVRVSERXPGDSW 340
+G + L RLF SL GL ++ PG+ W
Sbjct: 410 VGTVIQGLSRLFSSLYGLRFVPADISPGEVW 440
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 177 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 296
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 171 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 260
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 6.3
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 84 PHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTK 263
P S S + A + L + V R F + +EH+ K+LE+Q + L +
Sbjct: 171 PSSSSCNLVNANSLDIYLNINNLKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQ 229
Query: 264 SKDA 275
SKDA
Sbjct: 230 SKDA 233
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -1
Query: 797 RGXRRXGRG--XXGXGGXXGXXGXGGGGG 717
RG R GRG G GG G G GGG
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGGRGGARGGG 39
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAXVQNTVQESQ 528
KAKE ++ R +RTA E+RK +E+ R + A Q + Q
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ 213
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 804 GVXXAXPPPPPPFXP 848
GV A PPPPPP P
Sbjct: 939 GVMPAFPPPPPPPPP 953
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 394 LEQSRQNIERTAEELRKAHPDVEK 465
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 715 IPPPPPXPXXPXXPP 759
IPPPP P P PP
Sbjct: 272 IPPPPATPSQPPRPP 286
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 141 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 317
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 318 LQQL 329
Q+
Sbjct: 73 NNQI 76
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +1
Query: 379 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAXVQNTVQESQKLAKKVSS 552
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+++ + S
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-EKISRNLRS 187
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 409 ASTVPKPPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQAL 287
AST+ K PWP + L +P + + CS+ +E ++ +
Sbjct: 38 ASTLEKEPWPASTALLVMPG---GRDMGYCSSFNETIYRKI 75
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,357,530
Number of Sequences: 5004
Number of extensions: 38561
Number of successful extensions: 356
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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