Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G17
(925 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 39 0.001
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.40
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.70
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.70
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.93
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.93
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.6
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.1
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 28 2.1
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 27 2.8
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 2.8
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 2.8
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 4.9
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.5
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 26 6.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.5
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 26 8.6
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 26 8.6
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = -1
Query: 925 GGGGGXXXXXXXXXGXXXGXGGXXXGXGGGXXXXXXXXGGXGGGXXXXGGGG 770
GG GG G G GG G GGG GG GGG GG G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 33.5 bits (73), Expect = 0.043
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -1
Query: 922 GGGGXXXXXXXXXGXXXGXGGXXXGXGGGXXXXXXXXGGXGGGXXXXGGG 773
GG G G G GG G GG GG GGG GGG
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +3
Query: 771 PPPPXXXXPPPXPPXXXXXXXXPPPXPXXXPPXPXXXPXXXXXXXXXPPPP 923
PPPP P P P PPP P P P P PPPP
Sbjct: 734 PPPPAVIVPTPAP----APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 33.9 bits (74), Expect = 0.033
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 771 PPPPXXXXPPPXPPXXXXXXXXPPPXPXXXPPXP 872
PP P PPP PP PPP P PP P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPP---PPPP 783
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 30.3 bits (65), Expect = 0.40
Identities = 27/113 (23%), Positives = 47/113 (41%)
Frame = +2
Query: 83 PHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTK 262
P S S + A + L + V R F + +EH+ K+LE+Q + L +
Sbjct: 171 PSSSSCNLVNANSLDIYLNINNLKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQ 229
Query: 263 SKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIER 421
SKDA A S+ + S + +L N K++ +L+ ++ R
Sbjct: 230 SKDASSNLTACNRSGSSLSSNFYSSRLSKKTSLASLN-KSRASLQHKIMSLSR 281
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.70
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 777 PPXXXXPPPXPPXXXXXXXXPPPXP 851
PP PPP PP PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 29.5 bits (63), Expect = 0.70
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 296 KDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAXE 433
KDG+++ +LN FAK L + + +A + + IE+++ E
Sbjct: 111 KDGTDAFANELNLFAKKLGFSKNSFDARALDTESEDETEIEKSSSE 156
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.93
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 771 PPPPXXXXPPPXPPXXXXXXXXPPPXPXXXPPXP 872
PPPP PPP P PP P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 837 PPPXPXXXPPXPXXXPXXXXXXXXXPPP 920
PPP P PP P P PPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +3
Query: 774 PPPXXXXPPPXPPXXXXXXXXPPPXPXXXPPXP 872
PP PP PP PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.93
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 3/54 (5%)
Frame = +3
Query: 771 PPPPXXXXPPPXPPXXXXXXXXPPPXPXX---XPPXPXXXPXXXXXXXXXPPPP 923
PP PP PP PP P PP P P P PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 771 PPPPXXXXPPPXPPXXXXXXXXPPPXPXXXPPXPXXXP 884
P PP PP P PP P PP P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAP-APPPAPAPAP 484
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 771 PPPPXXXXPPPXPPXXXXXXXXPPPXPXXXPPXP 872
PPP P PP PP P PP P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 777 PPXXXXPPPXPPXXXXXXXXPPPXPXXXPP 866
PP PPP P PP P PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/51 (29%), Positives = 15/51 (29%), Gaps = 3/51 (5%)
Frame = +3
Query: 780 PXXXXPPPXPPXXXXXXXXPPPXPXXXPPXPXXXPXXXXXXXXXP---PPP 923
P PP P PP P PP P P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 26.6 bits (56), Expect = 4.9
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 5/56 (8%)
Frame = +3
Query: 771 PPPPXXXXPPPX--PPXXXXXXXXP---PPXPXXXPPXPXXXPXXXXXXXXXPPPP 923
PP P PP PP P PP P PP P P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +3
Query: 771 PPPPXXXXPPPXPPXXXXXXXXPPPXPXXXPPXPXXXP 884
PP P PP P P P PP P P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = -1
Query: 925 GGGGGXXXXXXXXXGXXXGXGGXXX-GXGGGXXXXXXXXGGXGGGXXXXGG 776
GG GG G G GG GGG GG GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = -1
Query: 925 GGGGGXXXXXXXXXGXXXGX-GGXXXGXGGGXXXXXXXXGGXGGGXXXXGG 776
GG GG G G GG G GG GG GG GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 871 GXGGXXXGXGGGXXXXXXXXGGXGGGXXXXGGGG 770
G G G GG GG GGG GGG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGG 39
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 170 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT---KSKDAQDFSKAWKDGSESVLQQLNAFA 340
++ DFFK + ++ H TL ++ NSL+ +K + G + +LN
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLSSFLSTKSTSASENKFHGGLNWLSLKLNLLL 115
Query: 341 KSLQGALGDA 370
+ LQG + A
Sbjct: 116 R-LQGRMNSA 124
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 275 QDFSKAWKDGSESVLQQLNAFAKSLQGALGD-ANGKAKEALEQSR-QNIE 418
+D + A+ + SVLQ+L+ + +QG LG N AL Q + QN++
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALRQDKGQNLQ 128
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 407 ASTVPKPPWPCRSRLRALPG 348
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.5 bits (58), Expect = 2.8
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +2
Query: 230 TLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGA------LGDANGKAKEA 391
T++ + SL K D + ++ ES L L L A L D+ KAK
Sbjct: 354 TIQIELESLRKETDTTSVER--REKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTE 411
Query: 392 LEQSRQNIERTAXE 433
LEQ+R +ERT E
Sbjct: 412 LEQARIELERTQRE 425
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 176 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 295
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 4/55 (7%)
Frame = +3
Query: 771 PPPPXXXXP----PPXPPXXXXXXXXPPPXPXXXPPXPXXXPXXXXXXXXXPPPP 923
PPPP P PP P PPP P P PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 4/55 (7%)
Frame = +3
Query: 771 PPPPXXXXP----PPXPPXXXXXXXXPPPXPXXXPPXPXXXPXXXXXXXXXPPPP 923
PPPP P PP P PPP P P PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 4/55 (7%)
Frame = +3
Query: 771 PPPPXXXXP----PPXPPXXXXXXXXPPPXPXXXPPXPXXXPXXXXXXXXXPPPP 923
PPPP P PP P PPP P P PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 4/55 (7%)
Frame = +3
Query: 771 PPPPXXXXP----PPXPPXXXXXXXXPPPXPXXXPPXPXXXPXXXXXXXXXPPPP 923
PPPP P PP P PPP P P PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 4/55 (7%)
Frame = +3
Query: 771 PPPPXXXXP----PPXPPXXXXXXXXPPPXPXXXPPXPXXXPXXXXXXXXXPPPP 923
PPPP P PP P PPP P P PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 4/55 (7%)
Frame = +3
Query: 771 PPPPXXXXP----PPXPPXXXXXXXXPPPXPXXXPPXPXXXPXXXXXXXXXPPPP 923
PPPP P PP P PPP P P PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 4/55 (7%)
Frame = +3
Query: 771 PPPPXXXXP----PPXPPXXXXXXXXPPPXPXXXPPXPXXXPXXXXXXXXXPPPP 923
PPPP P PP P PPP P P PPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 212 TKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQ-GALGDA 370
+K+ + E+Q +T DFS K + L+AF K L+ + GDA
Sbjct: 89 SKKSSASAEEQTEDITTESGELDFSSMKKKKKKKKSADLSAFEKELEASSTGDA 142
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/52 (28%), Positives = 15/52 (28%), Gaps = 1/52 (1%)
Frame = +3
Query: 771 PPPPXXXXPPPXPPXXXXXXXXPPPXPXXXPPXP-XXXPXXXXXXXXXPPPP 923
PP P PP P PPP P P P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 140 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 316
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 317 LQQL 328
Q+
Sbjct: 73 NNQI 76
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 8.6
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = -1
Query: 496 ACSFXRRAVAFFSXSRVALAELXGRALDVLPRLFQSLLGLAVRVSERSLETLGEGVELLQ 317
A +F + A + + ++ + A V + +SLL A + ++ETL V
Sbjct: 221 AITFLQSAANLHQGTPITISSVEELAGAVPYNIIRSLLDTAYTKNVSNIETLSRDVAAEG 280
Query: 316 HGLGAVLPSLAEVL 275
+ G +L L +VL
Sbjct: 281 YSTGIILSQLHDVL 294
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,334,915
Number of Sequences: 5004
Number of extensions: 37680
Number of successful extensions: 239
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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