Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G15
(1111 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.094
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.38
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.38
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.38
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.7 bits (86), Expect = 0.001
Identities = 42/173 (24%), Positives = 46/173 (26%), Gaps = 10/173 (5%)
Frame = +1
Query: 589 IPPRXXT-RXXXSXPXXTXPPXRPLPXPXPALFXXXFXXPFFSXXPXX--PXXXSTPXXX 759
IPP + R P + P P+P P P P P ST
Sbjct: 232 IPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPP 291
Query: 760 XPSPXXLPRAXXXX-----PXSPPXXXRXTXXXXPXXLXSXXPXXPXXXXXRXSXXGAXX 924
P P A P PP R P S P S
Sbjct: 292 LPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSI 351
Query: 925 PPPPXXSXLPPXXXPXSPPXXXPXPPPXHXPXXXAXXSXXPPLXP--XXPTLP 1077
P PP PP P S P PPP + PP P P LP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Score = 37.5 bits (83), Expect = 0.003
Identities = 34/133 (25%), Positives = 36/133 (27%), Gaps = 4/133 (3%)
Frame = +1
Query: 712 SXXPXXPXXXSTPXXXXPSPXXLPRAXXXXPXSPPXXXRXTXXXXPXXLXSXXPXXPXXX 891
S P P S P P P+ P PP T P S P
Sbjct: 335 SLPPPPPPPRSNAAGSIPLP---PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 892 XXRXSXXGAXXPPP---PXXSXLPPXXXPXS-PPXXXPXPPPXHXPXXXAXXSXXPPLXP 1059
A PP + PP P S PP P PP P PPL P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Query: 1060 XXPTLPXXXXXXP 1098
P P P
Sbjct: 452 SAPIAPPLPAGMP 464
Score = 34.3 bits (75), Expect = 0.031
Identities = 37/175 (21%), Positives = 41/175 (23%), Gaps = 5/175 (2%)
Frame = +1
Query: 592 PPRXXTRXXXSXPXXTXPPXRPLPXPXP-----ALFXXXFXXPFFSXXPXXPXXXSTPXX 756
PP R P LP P P A S P P +
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 757 XXPSPXXLPRAXXXXPXSPPXXXRXTXXXXPXXLXSXXPXXPXXXXXRXSXXGAXXPPPP 936
P P RA P PP + P + P A PP
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Query: 937 XXSXLPPXXXPXSPPXXXPXPPPXHXPXXXAXXSXXPPLXPXXPTLPXXXXXXPV 1101
P P +PP P P PP P P P PV
Sbjct: 434 SAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPV 488
Score = 26.2 bits (55), Expect = 8.2
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 931 PPXXSXLPPXXXPXS-PPXXXPXPPPXHXPXXXAXXSXXPPLXPXXPTLP 1077
PP +P P P P PPP P S PP P P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSS--PPNSPPRPIAP 277
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.094
Identities = 35/150 (23%), Positives = 43/150 (28%)
Frame = +1
Query: 628 PXXTXPPXRPLPXPXPALFXXXFXXPFFSXXPXXPXXXSTPXXXXPSPXXLPRAXXXXPX 807
P P P P P P++ P + P P P PS P P
Sbjct: 1083 PPVPAPSGIP-PVPKPSVAAPPVPKPSVAVPPV-PAPSGAPPVPKPSVAAPP---VPVPS 1137
Query: 808 SPPXXXRXTXXXXPXXLXSXXPXXPXXXXXRXSXXGAXXPPPPXXSXLPPXXXPXSPPXX 987
P + + P S P P A P P S +PP P +
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSV-------AAPPVPAPSSGIPPVPKPAA--GV 1188
Query: 988 XPXPPPXHXPXXXAXXSXXPPLXPXXPTLP 1077
P PPP P PP+ P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 32.3 bits (70), Expect = 0.12
Identities = 33/143 (23%), Positives = 39/143 (27%), Gaps = 1/143 (0%)
Frame = +1
Query: 628 PXXTXPPXRPLPXPXPALFXXXFXXPFFSXXPXXPXXXSTPXXXXPSPXXLPRAXXXXPX 807
P P P P P++ P S P P S P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAP--SGAPPVPKP-SVAAPPVPVPSGAPPVPKPSVA 1148
Query: 808 SPPXXXRXTXXXXPXXLXSXXPXX-PXXXXXRXSXXGAXXPPPPXXSXLPPXXXPXSPPX 984
+PP P + P P A PP P S PP P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV--G 1206
Query: 985 XXPXPPPXHXPXXXAXXSXXPPL 1053
P PPP P + PP+
Sbjct: 1207 VPPVPPPSTAPPVPTPSAGLPPV 1229
Score = 31.9 bits (69), Expect = 0.17
Identities = 35/168 (20%), Positives = 45/168 (26%), Gaps = 6/168 (3%)
Frame = +1
Query: 622 SXPXXTXPPXRPLPXPXPALFXXXFXXPFFSXXPXXPXXXSTPXXXXPSPXXLPRAXXXX 801
S P PP P P P + P P P +P
Sbjct: 959 SGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLS 1018
Query: 802 PXSPPXXXRXTXXXXPXXLXSXXPXXPXXXXXRX---SXXGAXXPPPPXXSXLPPXXXPX 972
+PP + P + S P P S GA PPP +
Sbjct: 1019 SKAPPVPL-PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP 1077
Query: 973 SPPXXXPXPPPXHXPXXXAXXSXXPPLXP---XXPTLPXXXXXXPVPR 1107
+P P P P P PP+ P +P PVP+
Sbjct: 1078 APSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPK 1125
Score = 28.7 bits (61), Expect = 1.5
Identities = 34/138 (24%), Positives = 43/138 (31%), Gaps = 6/138 (4%)
Frame = +1
Query: 712 SXXPXXPXXXSTPXXXXPSPXXLPRAXXXXPXSPPXXXRXTXXXXPXXLXSXXPXXPXXX 891
S P P P P+P +P +PP + + P S P P
Sbjct: 1071 SEIPSIPAPSGAPPV--PAPSGIPPVPKPSVAAPPVP-KPSVAVPPVPAPSGAPPVPKPS 1127
Query: 892 XXRXSXX-GAXXPPPPXXSXL-PPXXXPXSPPXXXPXPPPX-HXPXXXAXXSXXPPLXPX 1062
+ PP P S PP P P P P P P A S PP+
Sbjct: 1128 VAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP---PVPKPSVAAPPVPAPSSGIPPVPKP 1184
Query: 1063 X---PTLPXXXXXXPVPR 1107
P +P PVP+
Sbjct: 1185 AAGVPPVPPPSEAPPVPK 1202
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.38
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 916 AXXPPPPXXSXLPPXXXPXSPPXXXPXPPP 1005
A PPPP S PP P P PPP
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +1
Query: 925 PPPPXXSXLPPXXX-PXSPPXXXPXPPPXHXPXXXAXXSXXPP 1050
PP S PP P PP PPP P A PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +1
Query: 925 PPPPXXSXLPPXXXPXSPPXXXPXPPPXHXPXXXAXXSXXPPLXPXXP 1068
PP P + P P +P P P P A S PP P P
Sbjct: 1448 PPAPMHAVAP--VQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVP 1493
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 931 PPXXSXLPPXXXPXS-PPXXXPXPPPXHXPXXXAXXSXXPPLXPXXPTLP 1077
PP S PP P S PP P P P + S PP+ P P P
Sbjct: 158 PPIPSKAPPI--PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.5 bits (63), Expect = 0.88
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +1
Query: 916 AXXPPPPXXSXLPPXXXPXSPPXXXPXP---PPXHXPXXXAXXSXXPPLXPXXP 1068
A PP P PP P P P P PP S PP P P
Sbjct: 127 APAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/58 (25%), Positives = 19/58 (32%)
Frame = +1
Query: 928 PPPXXSXLPPXXXPXSPPXXXPXPPPXHXPXXXAXXSXXPPLXPXXPTLPXXXXXXPV 1101
PPP + PP +PP PPP P L P +P P+
Sbjct: 150 PPPSPASAPPIPSK-APPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +1
Query: 925 PPPPXXSXLPPXXXPXSPPXXXPXPPPXHXPXXXAXXSXXPPLXPXXPT-LPXXXXXXPV 1101
PP P P P P P P P A PP P P+ +P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 1102 P 1104
P
Sbjct: 204 P 204
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.38
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = +1
Query: 925 PPPPXXSXLPPXXXPXSPPXXXPXP----PPXHXPXXXAXXSXXPPLXPXXPTL 1074
PPPP + + P P P P P PP P + PP P P +
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/62 (29%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +1
Query: 856 LXSXXPXXPXXXXXRXSXXGAXXPPP-PXXSXLPPXXXPXSPPXXXPXPPPXHXPXXXAX 1032
L S P P + PPP P PP P P PPP P A
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Query: 1033 XS 1038
S
Sbjct: 789 GS 790
Score = 27.1 bits (57), Expect = 4.7
Identities = 17/66 (25%), Positives = 20/66 (30%), Gaps = 5/66 (7%)
Frame = +1
Query: 925 PPPPXXSXLP-----PXXXPXSPPXXXPXPPPXHXPXXXAXXSXXPPLXPXXPTLPXXXX 1089
PPPP +P P P P PPP P PP P +
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 1090 XXPVPR 1107
P P+
Sbjct: 793 YAPAPQ 798
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,231,637
Number of Sequences: 5004
Number of extensions: 11601
Number of successful extensions: 110
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 587693690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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