Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G12
(1092 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.29
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 2.7
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 3.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.8
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.1 bits (57), Expect = 0.29
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 576 PXPXPPPPPPXXXXP 620
P P PPPPPP P
Sbjct: 339 PKPAPPPPPPSSSGP 353
Score = 26.6 bits (56), Expect = 0.39
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 558 SSXPPXPXPXPPPP 599
S PP P P PPPP
Sbjct: 335 SDTPPKPAPPPPPP 348
Score = 23.0 bits (47), Expect = 4.8
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +3
Query: 1032 SXXPXSPAPXXPPPLXGPP 1088
S P PAP PPP P
Sbjct: 335 SDTPPKPAPPPPPPSSSGP 353
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.0 bits (52), Expect = 1.2
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 915 PPPQXAPXPPXPLPPXXXPRPPPPXXXPXXXXXXPXLPLSXXP 1043
PP AP PP P PP P P P +P P
Sbjct: 410 PPSAGAPMPPIPNMSNMSGMPPLP-NMPGSMPTMPTMPSMAGP 451
Score = 23.4 bits (48), Expect = 3.6
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 906 PXPPPPQXAPXPPXPLPPXXXPRPPP 983
P P P Q P PP PPP
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPP 48
Score = 23.4 bits (48), Expect = 3.6
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +3
Query: 552 PXSSXPPXPXPXPPPPPPXXXXP 620
P PP P PPP P P
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPP 56
Score = 22.6 bits (46), Expect = 6.3
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +3
Query: 906 PXPPP-PQXAPXPPXPLPPXXXPRPPPPXXXP 998
P P P P +P P P + PPP P
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52
Score = 22.6 bits (46), Expect = 6.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 1024 SPSPXXPPPXPPXXPP 1071
+PS PP PP PP
Sbjct: 41 NPSQGPPPGGPPGAPP 56
Score = 22.2 bits (45), Expect = 8.3
Identities = 11/39 (28%), Positives = 13/39 (33%)
Frame = +3
Query: 903 QPXPPPPQXAPXPPXPLPPXXXPRPPPPXXXPXXXXXXP 1019
Q P + +P P PP P PP P P
Sbjct: 29 QSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISP 67
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 2.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 567 PPXPXPXPPPPPP 605
P P PPPPPP
Sbjct: 1852 PVSGSPEPPPPPP 1864
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.4 bits (48), Expect = 3.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 676 GGXGGGGXRGGXGG*X*XXGXXXXGGGGGGXGXGXG 569
G GG G G G GGGGGG G G
Sbjct: 23 GSSSAGGVVTGASGGSIVVGANN-GGGGGGLGIASG 57
Score = 23.4 bits (48), Expect = 3.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 687 GGGXVVGXGGXXGGGGGG 634
GG VVG GGGG G
Sbjct: 36 GGSIVVGANNGGGGGGLG 53
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 582 PXPPPPPP 605
P PPPPPP
Sbjct: 1355 PPPPPPPP 1362
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 687 GGGXVVGXGGXXGGGG 640
GGG + G GG G GG
Sbjct: 1706 GGGSLAGLGGLGGLGG 1721
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 4.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 687 GGGXVVGXGGXXGGGG 640
GGG + G GG G GG
Sbjct: 1702 GGGSLAGLGGLGGLGG 1717
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,650
Number of Sequences: 438
Number of extensions: 7511
Number of successful extensions: 50
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 36632304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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