Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G10
(967 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 32 0.70
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical ... 31 0.93
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.2
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.2
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.1
L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family ... 30 2.1
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.1
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.8
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 5.0
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 29 5.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 5.0
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 6.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 6.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 6.5
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 29 6.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 6.5
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/90 (27%), Positives = 29/90 (32%), Gaps = 1/90 (1%)
Frame = -1
Query: 967 AGGXXX-RGGGGGGPXGXXGGXVGGVGXXXXXXXXXXXXXXXXXXXXXXXXDRXRXWGGG 791
AGG RGGG GG G GG GG WGG
Sbjct: 49 AGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSAGGWGGS 108
Query: 790 XXGXEVGIRXXXWGKGKARXVSRKGGRGEQ 701
G + G G ++ S +GG G Q
Sbjct: 109 QGGSQGGSSGGWGGSSRSDSGSGQGGWGGQ 138
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGG G GG GG G
Sbjct: 188 GGQGGNQGGGGGRGGNQGGEQGGWG 212
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1
Query: 961 GXXXRGGGGGGPXGXXGGXVGGVG 890
G RGGGGGG G GG GG G
Sbjct: 25 GGGGRGGGGGGYSGGRGGGYGGGG 48
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GG GGG G GG GG G
Sbjct: 32 GGGGYSGGRGGGYGGGGGGGYGGGG 56
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 967 AGGXXXRGGGGGGPXGXXGGXVGGVG 890
+GG G GGGG G GG GG G
Sbjct: 16 SGGGSRGGYGGGGRGGGGGGYSGGRG 41
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 136 GGGGGCGGGGGGGCGGGGGGCGGGG 160
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 158 GGGGGCGGGGGGCGGGGGGGCGGGG 182
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGG 161
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGG 104
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 144 GGGGGCGGGGGGCGGGGGGCGGGGG 168
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 151 GGGGGCGGGGGGCGGGGGGCGGGGG 175
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGGG G GG GG
Sbjct: 166 GGGGCGGGGGGGCGGGGGGGCGG 188
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 961 GXXXRGGGGGGPXGXXGGXVGGVG 890
G GGGGGG G GG GG G
Sbjct: 130 GGGCGGGGGGGCGGGGGGGCGGGG 153
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 23 GGGGGGGGGCGGGCGGGGG 41
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGG G G GG GG G
Sbjct: 69 GGGCGGGGGGCGGGGGCGGGGGGCG 93
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCG 100
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG G GGGG G GG GG G
Sbjct: 126 GGGCGGGCGGGGGGGCGGGGGGGCG 150
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGG G GG GG G
Sbjct: 143 GGGGGGCGGGGGGCGGGGGGCGGGG 167
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 147 GGCGGGGGGCGGGGGGCGGGGGGCG 171
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGG G GG GG G
Sbjct: 150 GGGGGGCGGGGGGCGGGGGGCGGGG 174
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGG G GG GG G
Sbjct: 167 GGGCGGGGGGGCGGGGGGGCGGGCG 191
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 104 GGGGCGGGGGGGCGGGGGGGCGGGG 128
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGGG G GG GG
Sbjct: 111 GGGGGCGGGGGGGCGGGGGGGGG 133
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGGG G GG GG
Sbjct: 112 GGGGCGGGGGGGCGGGGGGGGGG 134
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 93 GGCGGGGGGCGGGGGCGGGGGGGCG 117
>AF098992-8|AAC67454.2| 239|Caenorhabditis elegans Hypothetical
protein F53C3.3 protein.
Length = 239
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1
Query: 967 AGGXXXRGGGGGGPXGXXGGXVGG 896
A G RGGGGGG G GG GG
Sbjct: 21 ARGGGGRGGGGGGARGGVGGRGGG 44
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 91 GGGRGGGGGGGGGRGGGGGGRGGGG 115
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 92 GGRGGGGGGGGGRGGGGGGRGGGGG 116
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 108 GGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG RGGGGGG G GG GG G
Sbjct: 99 GGGGGRGGGGGGRGGGGGGG-GGRG 122
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG RGGGGGG G GG GG G
Sbjct: 106 GGGGGRGGGGGGGGGRGGGG-GGRG 129
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1
Query: 961 GXXXRGGGGGGPXGXXGGXVGGVG 890
G RGGGGGG G GG GG G
Sbjct: 90 GGGGRGGGGGGGGGRGGGG-GGRG 112
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 68 GGNGGFGGGGGGNYGGGGGNQGGGG 92
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGG 78
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G G GG G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGG 77
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 61 GGGGGFGGGNGGFGGGGGGNYGGGG 85
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.7 bits (66), Expect = 1.6
Identities = 28/88 (31%), Positives = 29/88 (32%), Gaps = 2/88 (2%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVGXXXXXXXXXXXXXXXXXXXXXXXXDRXRXWGGGXX 785
GG GGG GGP G GG G G DR GG
Sbjct: 299 GGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRG 358
Query: 784 GXEVGIRXXXWG--KGKARXVSRKGGRG 707
G G R G +G R R GGRG
Sbjct: 359 GFRGGDRGGFRGGDRGGDRGGFR-GGRG 385
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGGG G GG GG
Sbjct: 792 GGNGGSGGGGGGGGGGSGGSGGG 814
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 787 GGGGGGGNGGSGGGGGGGG 805
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 788 GGGGGGNGGSGGGGGGGGG 806
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGG 129
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGG 136
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGGG G GG GG
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGG 141
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G G GG G
Sbjct: 270 GGYAGGGGGGGGSSGGYAGSSGGGG 294
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 28 GGGGGGCGGGCGGGCGGGG 46
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGG G G GG GG G
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCG 111
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCG 118
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 101 GGCGGGGGGCGGGGGGCGGGGGGCG 125
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGG G GG GG G
Sbjct: 104 GGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGG G GG GG G
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG G GGGG G GG GG G
Sbjct: 148 GGGSSGGCGGGGGGGCGGGGGGGCG 172
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 98 GGGGGCGGGGGGCGGGGGGCGGGGG 122
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 105 GGGGGCGGGGGGCGGGGGGCGGGGG 129
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGG 136
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGGG G GG GG
Sbjct: 119 GGGGGCGGGGGGCGGGGGGGCGG 141
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G G GG G
Sbjct: 270 GGYAGGGGGGGGSSGGYAGSSGGGG 294
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 28 GGGGGGCGGGCGGGCGGGG 46
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGG G G GG GG G
Sbjct: 87 GGGCGGGGGGCGGGGGCGGGGGGCG 111
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCG 118
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 101 GGCGGGGGGCGGGGGGCGGGGGGCG 125
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGG G GG GG G
Sbjct: 104 GGGGGGCGGGGGGCGGGGGGCGGGG 128
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGG GG G GG GG G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCG 132
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGG G GG GG G
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGG 135
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG G GGGG G GG GG G
Sbjct: 148 GGGSSGGCGGGGGGGCGGGGGGGCG 172
>L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family
protein 1, isoform c protein.
Length = 113
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGV 893
GG GGGGGG G GG GG+
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGI 77
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 56 GGGGGGGGGGFGGGNGGFG 74
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGGG G G GG
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGG 75
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 53 GGGGGGGGGGGGGFGGGNG 71
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G GG GG G
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGGGG 78
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGGG G G GG G
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGG 77
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 961 GXXXRGGGGGGPXGXXGGXVGGVG 890
G GGGGGG G GG GG G
Sbjct: 94 GSLIGGGGGGGNYGGGGGNQGGGG 117
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGG P G GG GG
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGG 638
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 967 AGGXXXRGGGGGGPXGXXGGXVGG 896
AGG GGGGGP GG GG
Sbjct: 614 AGGGPGGPGGGGGPPRGPGGGGGG 637
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGG P G GG GG
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGGGG 638
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 967 AGGXXXRGGGGGGPXGXXGGXVGG 896
AGG GGGGGP GG GG
Sbjct: 614 AGGGPGGPGGGGGPPRGPGGGGGG 637
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG G GGGG G GG GG+G
Sbjct: 117 GGYGGGGDGGGGYGGYGGGGYGGMG 141
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GGGGG G GG +GG G
Sbjct: 150 GGYGGGGGGGGDFGGYGGGGMGGGG 174
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG G GGGG G GG GG G
Sbjct: 168 GGMGGGGYGGGGDGGYGGGGFGGGG 192
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/86 (25%), Positives = 22/86 (25%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVGXXXXXXXXXXXXXXXXXXXXXXXXDRXRXWGGGXX 785
G R GGGGGP G GG G WGG
Sbjct: 34 GWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGG 93
Query: 784 GXEVGIRXXXWGKGKARXVSRKGGRG 707
G G WG GG G
Sbjct: 94 GGRGGGGRGDWGGNNNGGGGNWGGGG 119
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -1
Query: 967 AGGXXXRGGGGGGPXGXXGGXVGGVG 890
AGG GGGGGG G GG GG G
Sbjct: 474 AGGFGSFGGGGGG--GGFGGGGGGFG 497
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 482 GGGGGGGFGGGGGGFGGGG 500
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGGG G GG GG
Sbjct: 54 GGGGGGGGGGGGFGGGNGGFGGG 76
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 56 GGGGGGGGGGFGGGNGGFG 74
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGG 896
GG GGGGGG G G GG
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGG 75
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 53 GGGGGGGGGGGGGFGGGNG 71
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 967 AGGXXXRGGGGGGPXGXXGGXVGGVG 890
AGG GGGGG G GG GG G
Sbjct: 403 AGGGYNAGGGGGA--GGGGGYAGGAG 426
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
G GGGGGG G GG GG G
Sbjct: 214 GSGGGGGGGGGGGYGSGGGWGGGGG 238
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG RGGG G G GG GG G
Sbjct: 530 GGAGGRGGGAHGGAGRGGGYQGGRG 554
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG RGGG G G GG GG G
Sbjct: 530 GGAGGRGGGAHGGAGRGGGYQGGRG 554
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -1
Query: 946 GGGGGGPXGXXGGXVGGVG 890
GGGGGG G GG GG G
Sbjct: 22 GGGGGGCGGGCGGGCGGGG 40
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 964 GGXXXRGGGGGGPXGXXGGXVGGVG 890
GG GG GGG G GG GG G
Sbjct: 101 GGGGYGGGHGGGHGGAVGGGYGGGG 125
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 949 RGGGGGGPXGXXGGXVGG 896
RGGGGGG G GG GG
Sbjct: 8 RGGGGGGFRGGRGGDRGG 25
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,371,808
Number of Sequences: 27780
Number of extensions: 235386
Number of successful extensions: 1748
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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