Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G09
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four ... 35 0.46
X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2 prot... 30 10.0
AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 10.0
AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 10.0
AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 10.0
AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 10.0
AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 10.0
AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 10.0
AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2 (c... 30 10.0
AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2 pr... 30 10.0
>AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four and
a half LIM domain protein 2 protein.
Length = 151
Score = 34.7 bits (76), Expect = 0.46
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 491 STEACSSTLLLPRASTEPTARVSXCPLLTRSIPTSSLTAMS 613
S+ +S+ L PR S+ T R+S CP + ++P S+ +A S
Sbjct: 69 SSATAASSQLEPRVSSPKTIRISVCPAMRNNMPCSAFSAKS 109
>X98330-1|CAA66975.1| 4967|Homo sapiens ryanodine receptor 2
protein.
Length = 4967
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -1
Query: 666 RXGSLGGFSHLHHKGFXDDMAVXEEVGIDLVRSGQXETLAVGSVEARGSKSVXEXASVDP 487
R GS+ + +HH+G DD GI L RS E+ + + +D
Sbjct: 383 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 435
Query: 486 FSHXARSPHENIEVLSVVEDSEDFXGFFH 400
S A++ ++ + SV +D G+FH
Sbjct: 436 LSKKAKASTVDLPIESVSLSLQDLIGYFH 464
>AL513130-1|CAI15936.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -1
Query: 666 RXGSLGGFSHLHHKGFXDDMAVXEEVGIDLVRSGQXETLAVGSVEARGSKSVXEXASVDP 487
R GS+ + +HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 486 FSHXARSPHENIEVLSVVEDSEDFXGFFH 400
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL445473-1|CAH71393.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -1
Query: 666 RXGSLGGFSHLHHKGFXDDMAVXEEVGIDLVRSGQXETLAVGSVEARGSKSVXEXASVDP 487
R GS+ + +HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 486 FSHXARSPHENIEVLSVVEDSEDFXGFFH 400
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL442065-1|CAI15350.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -1
Query: 666 RXGSLGGFSHLHHKGFXDDMAVXEEVGIDLVRSGQXETLAVGSVEARGSKSVXEXASVDP 487
R GS+ + +HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 486 FSHXARSPHENIEVLSVVEDSEDFXGFFH 400
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL391809-1|CAI14440.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -1
Query: 666 RXGSLGGFSHLHHKGFXDDMAVXEEVGIDLVRSGQXETLAVGSVEARGSKSVXEXASVDP 487
R GS+ + +HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 486 FSHXARSPHENIEVLSVVEDSEDFXGFFH 400
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL365332-1|CAH71369.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -1
Query: 666 RXGSLGGFSHLHHKGFXDDMAVXEEVGIDLVRSGQXETLAVGSVEARGSKSVXEXASVDP 487
R GS+ + +HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 486 FSHXARSPHENIEVLSVVEDSEDFXGFFH 400
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL359924-1|CAI22065.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -1
Query: 666 RXGSLGGFSHLHHKGFXDDMAVXEEVGIDLVRSGQXETLAVGSVEARGSKSVXEXASVDP 487
R GS+ + +HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 486 FSHXARSPHENIEVLSVVEDSEDFXGFFH 400
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AL356773-1|CAH73918.1| 4965|Homo sapiens ryanodine receptor 2
(cardiac) protein.
Length = 4965
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -1
Query: 666 RXGSLGGFSHLHHKGFXDDMAVXEEVGIDLVRSGQXETLAVGSVEARGSKSVXEXASVDP 487
R GS+ + +HH+G DD GI L RS E+ + + +D
Sbjct: 381 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 433
Query: 486 FSHXARSPHENIEVLSVVEDSEDFXGFFH 400
S A++ ++ + SV +D G+FH
Sbjct: 434 LSKKAKASTVDLPIESVSLSLQDLIGYFH 462
>AJ300340-1|CAC18855.1| 4967|Homo sapiens ryanodine receptor 2
protein.
Length = 4967
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/89 (25%), Positives = 38/89 (42%)
Frame = -1
Query: 666 RXGSLGGFSHLHHKGFXDDMAVXEEVGIDLVRSGQXETLAVGSVEARGSKSVXEXASVDP 487
R GS+ + +HH+G DD GI L RS E+ + + +D
Sbjct: 383 RMGSIQRKAIMHHEGHMDD-------GISLSRSQHEESRTARVIRSTVFLFNRFIRGLDA 435
Query: 486 FSHXARSPHENIEVLSVVEDSEDFXGFFH 400
S A++ ++ + SV +D G+FH
Sbjct: 436 LSKKAKASTVDLPIESVSLSLQDLIGYFH 464
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,656,305
Number of Sequences: 237096
Number of extensions: 1508685
Number of successful extensions: 2711
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2711
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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