Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP19_F_G07
(987 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.012
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.035
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.19
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.33
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 4.1
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 8.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +1
Query: 199 PTPPPPXXXXXXXXXXXXXXXXXPPPPXRXXXPPPPXXAPXXAXXXPPPPLP 354
P PPPP PPP PPPP P A PPPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPV---PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 33.5 bits (73), Expect = 0.047
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +2
Query: 530 PXAXXXPPAPPPP---XXXPPXPPPPP 601
P PP PPPP PP PPPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.44
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
P A P P P PP PPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
P A P PPP PPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 6/31 (19%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPP------XPPPPP 601
PP A P P P PP PPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 551 PAPPPPXXXPPXPPPPP 601
P PPPP P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAP 748
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.5 bits (78), Expect = 0.012
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +2
Query: 548 PPAPPPPXXXPPXPPPPP 601
PP PPPP PP PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPP 27
Score = 31.1 bits (67), Expect = 0.25
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +2
Query: 530 PXAXXXPPAPPP---PXXXPPXPPPP 598
P PP PPP P PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.44
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +2
Query: 527 PPXAXXXPPAPP---PPXXXPPXPPP 595
PP PP PP PP PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.5 bits (63), Expect = 0.76
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 268 PPPPXRXXXPPPPXXAPXXAXXXPPPP 348
PPPP PPPP P PPPP
Sbjct: 9 PPPP-----PPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 493 PPPPXXPXXXXPXXRXXXPPRPPPP 567
PPPP P P + PP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQ---PPPPPPP 30
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 274 PPXRXXXPPPPXXAPXXAXXXPPPP 348
PP PPPP + PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 6/24 (25%)
Frame = +2
Query: 548 PPAPPPPXXXPP------XPPPPP 601
PP PPP PP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 7/29 (24%)
Frame = +2
Query: 536 AXXXPPAPPPPXXXP-------PXPPPPP 601
A P PPPP P P PPPPP
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 295 PPPPXXAPXXAXXXPPPPLPXXG 363
PPPP P PPP P G
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.035
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
PP + PP+ PP PP PPPP
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 33.1 bits (72), Expect = 0.062
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 271 PPPXRXXXPPPPXXAPXXA--XXXPPPPLP 354
PPP PPPP P A PPPPLP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.58
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 530 PXAXXXPPAPPPPXXXPPXPPPPP 601
P P PPPP PP P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 29.5 bits (63), Expect = 0.76
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +2
Query: 527 PPXAXXXPP--APPPPXXXPPXPPPP 598
PP PP APP P P PPPP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 5.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 548 PPAPPPPXXXPPXPPPPP 601
P + PP P PPPPP
Sbjct: 1694 PQSAAPPQMSAPTPPPPP 1711
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPP 598
PP P PPP PP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
P + PP PP PP PP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Frame = +2
Query: 536 AXXXPPAP---PPPXXXPPXPPPPP 601
A PP P PPP PP P PP
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 199 PTPPPPXXXXXXXXXXXXXXXXXPPPPXRXXXPPPPXXAPXXAXXXPPPPLP 354
P PPP PPPP R PP PPPP P
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 29.1 bits (62), Expect = 1.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
PP P APP P P PP PP
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPP 598
PP P APP P P PP P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
PP A PP P PP PP P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 268 PPPPXRXXXPPPPXXAPXXAXXXPPPPL 351
P PP PPPP + PPPL
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPL 379
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
P PP PP PP P P P
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
PP + P PP PPPPP
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
PP PP PPP PPP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 25.8 bits (54), Expect = 9.4
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 7/61 (11%)
Frame = +1
Query: 193 PXPTPP------PPXXXXXXXXXXXXXXXXXPP-PPXRXXXPPPPXXAPXXAXXXPPPPL 351
P PTPP PP PP PP PP P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 352 P 354
P
Sbjct: 476 P 476
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 193 PXPTPPPPXXXXXXXXXXXXXXXXXPPPPXRXXXPPPPXXAPXXAXXXPPPPLP 354
P P PP PPP PP P AP PPP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 295 PPPPXXAPXXAXXXPPPPL 351
PPPP AP A P PPL
Sbjct: 5 PPPPPPAPAPAAAAPAPPL 23
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
PP A P A PP PP PPPP
Sbjct: 184 PPSAPSLPSAVPP---MPPKVPPPP 205
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 600 GGGGGXGGXXXG-GGGAGGXXXAXGG 526
GG GG GG G GG +GG A GG
Sbjct: 45 GGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -1
Query: 600 GGGGGXGGXXXGGGGA--GGXXXAXGG 526
G GG GG G GGA GG A GG
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 25.8 bits (54), Expect = 9.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 600 GGGGGXGGXXXGGGGAGGXXXAXGG 526
G GG GG GG GG + GG
Sbjct: 39 GRGGARGGRGGRGGARGGRGGSSGG 63
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.8
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPPPP 601
PP A + P PP PPPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 527 PPXAXXXPPAPPPPXXXPPXPPP 595
P + PP P P PP PPP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 530 PXAXXXPPAPPPPXXXPPXPPP 595
P PP P P PP PPP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPP 1213
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 530 PXAXXXPPAPPPPXXXPPXPPPPP 601
P PP P P PPPPP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPP 748
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.4 bits (48), Expect(2) = 8.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 578 PPXPPPPP 601
PP PPPPP
Sbjct: 307 PPPPPPPP 314
Score = 20.6 bits (41), Expect(2) = 8.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 548 PPAPPPP 568
PP PPPP
Sbjct: 306 PPPPPPP 312
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,117,690
Number of Sequences: 5004
Number of extensions: 17238
Number of successful extensions: 357
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 509282430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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